Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8a22
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 29 1.7
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 29 1.7
U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf (tbp-associ... 28 4.0
AF016680-1|AAB66163.2| 458|Caenorhabditis elegans Synaptotagmin... 28 4.0
Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical p... 27 7.0
AF078780-1|AAC26911.1| 354|Caenorhabditis elegans Serpentine re... 27 7.0
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 9.2
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 9.2
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 9.2
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 9.2
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormo... 27 9.2
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 429 CTTNTEITKGNKTNKNFQEEHLVGRCTTNTGRANNGRANKSRAN 298
C+T T I KT K+ G+C N R NK +AN
Sbjct: 107 CSTTTVILSTIKTEKSLSNRGKCGKCGQNFERGEIKAHNKGKAN 150
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 429 CTTNTEITKGNKTNKNFQEEHLVGRCTTNTGRANNGRANKSRAN 298
C+T T I KT K+ G+C N R NK +AN
Sbjct: 107 CSTTTVILSTIKTEKSLSNRGKCGKCGQNFERGEIKAHNKGKAN 150
>U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 11.1
protein.
Length = 345
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 355 MYHEHRPREQWPG*QKPGEQRPGDRVVDE 269
+ +H+P E+ PG +P RP ++ DE
Sbjct: 198 LIQQHQPEEEAPGPSRPAPARPARKLDDE 226
>AF016680-1|AAB66163.2| 458|Caenorhabditis elegans Synaptotagmin
protein 5 protein.
Length = 458
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 273 MSTSARDGCLYRNGASIGMINASLNTAVLSMPCIRAMTAALS*ACPL 133
M+ S R L RNG S ++ + T+ S PC A+ S +C L
Sbjct: 68 MNGSYRARVLSRNGCSPPWMDRNFETSTRSSPCTSPAIASTSDSCEL 114
>Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRINHSDRGTIPIEAPVTRGRAHRPLDRP 291
CC + D + GVQ + H + T +E P R RP D P
Sbjct: 77 CCCNDADGCNLGFIGVQPKYAHGQQCTNSMEVPNEDIRQFRPCDDP 122
>Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRINHSDRGTIPIEAPVTRGRAHRPLDRP 291
CC + D + GVQ + H + T +E P R RP D P
Sbjct: 77 CCCNDADGCNLGFIGVQPKYAHGQQCTNSMEVPNEDIRQFRPCDDP 122
>AF078780-1|AAC26911.1| 354|Caenorhabditis elegans Serpentine
receptor, class h protein79 protein.
Length = 354
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 325 IVRAACVRGTSAD*VLFLEVFICFVSFCYFCVRGTSADK 441
++ ACV G S + + + IC + + YF + G ++ K
Sbjct: 211 LLAIACVLGVSFEILQMIFFIICCLHYLYFAINGFTSKK 249
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 196 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 252
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 196 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 252
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 CCRHGTDARHGKHSGVQTRI--NHSDRGTIPIEAPVTRGRAHRPLDRPAFVRPAFVSPA 324
C HGT +HG G+ I S P+ + A+ P A RP VSPA
Sbjct: 267 CDIHGTQRKHGGRPGMDPNIFVKSSPTAAQPVHIQDSPRAAYHPQVNTA--RPVSVSPA 323
>AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 135 protein.
Length = 362
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 182 CRASVP*RQHYRKPVLCNFLYLNRHFLISLKS 87
CR R HY+ P +C F + R L +K+
Sbjct: 45 CRKDKSCRIHYKDPKICRFCRMERCVLAGMKT 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,651,203
Number of Sequences: 27780
Number of extensions: 234115
Number of successful extensions: 762
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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