Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a22
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.69 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.69 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   4.9  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   4.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 557 RFY*TQVAMRHDYCRTKKNHNKTEIAKRNKPIKHFQEDSL 438
           R Y   +   H Y   +K +NK EI   N  I+ F  D L
Sbjct: 420 RIYKRIIDYYHSYKMHQKPYNKDEIIYPNLKIESFTVDKL 459


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 557 RFY*TQVAMRHDYCRTKKNHNKTEIAKRNKPIKHFQEDSL 438
           R Y   +   H Y   +K +NK EI   N  I+ F  D L
Sbjct: 420 RIYKRIIDYYHSYKMHQKPYNKDEIIYPNLKIESFTVDKL 459


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 321 GHCSRGLCSWYICR 362
           GHC +G+C   ICR
Sbjct: 72  GHCEKGVC---ICR 82


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 321 GHCSRGLCSWYICR 362
           GHC +G+C   ICR
Sbjct: 47  GHCEKGVC---ICR 57


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 128 FLYLNRHF 105
           FLYLN+HF
Sbjct: 204 FLYLNKHF 211


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 128 FLYLNRHF 105
           FLYLN+HF
Sbjct: 204 FLYLNKHF 211


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -2

Query: 360 GRCTTNTGRANNGRANKSRANKG 292
           G   TN    NN   N +  N G
Sbjct: 231 GNANTNASNNNNNNNNNNNNNNG 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,262
Number of Sequences: 438
Number of extensions: 2662
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)