Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a19
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = +1

Query: 127 NNEFLNF---IVE*RDIYSVWTRSSDNSE 204
           NNEF      + + + IY +W   SDN E
Sbjct: 17  NNEFYRGRKKLSKHQQIYGIWADDSDNDE 45


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 149 IKLRNSLLSQKGNNLHEYF 93
           +K+R  +L+++ NNL EYF
Sbjct: 464 LKIRFVILNKQINNLIEYF 482


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 149 IKLRNSLLSQKGNNLHEYF 93
           +K+R  +L+++ NNL EYF
Sbjct: 189 LKIRFVILNKQINNLIEYF 207


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +2

Query: 425 IAIDKLYEYNDVEDKGHISPQCEQRPMSLKYMSWTLVDSVLSDKEVMVR 571
           I I + Y  +D+E++  ++   E   ++L +  W LV    + +EV+ +
Sbjct: 177 IEIPRDYTASDLEEEHRLAYFREDLGINLHHWHWHLVYPFEAAREVVAK 225


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -2

Query: 409 WCFGQQKLHRHLSVPFHLHRRVQFG*C 329
           W + + + H H SV     +  ++G C
Sbjct: 84  WVYYESRAHIHCSVKSESSQAAKYGGC 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,348
Number of Sequences: 336
Number of extensions: 2926
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)