Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8a19
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036340-1|AAH36340.1| 392|Homo sapiens C1orf85 protein protein. 32 1.3
BC018757-1|AAH18757.1| 406|Homo sapiens chromosome 1 open readi... 32 1.3
BC011575-1|AAH11575.1| 415|Homo sapiens C1orf85 protein protein. 32 1.3
AL589685-6|CAI14164.1| 406|Homo sapiens chromosome 1 open readi... 32 1.3
AK075349-1|BAC11561.1| 406|Homo sapiens protein ( Homo sapiens ... 32 1.3
AY358450-1|AAQ88815.1| 406|Homo sapiens RGSV2553 protein. 32 1.7
AK125726-1|BAC86260.1| 572|Homo sapiens protein ( Homo sapiens ... 31 3.9
>BC036340-1|AAH36340.1| 392|Homo sapiens C1orf85 protein protein.
Length = 392
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +2
Query: 245 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 406
L++I+A + ++H +W G + V+ A +ST+ V W + + L ++
Sbjct: 42 LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 101
Query: 407 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 544
++ A+ +L E++ +V D P SL SW + DS+
Sbjct: 102 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 150
>BC018757-1|AAH18757.1| 406|Homo sapiens chromosome 1 open reading
frame 85 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +2
Query: 245 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 406
L++I+A + ++H +W G + V+ A +ST+ V W + + L ++
Sbjct: 56 LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 115
Query: 407 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 544
++ A+ +L E++ +V D P SL SW + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164
>BC011575-1|AAH11575.1| 415|Homo sapiens C1orf85 protein protein.
Length = 415
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +2
Query: 245 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 406
L++I+A + ++H +W G + V+ A +ST+ V W + + L ++
Sbjct: 65 LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 124
Query: 407 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 544
++ A+ +L E++ +V D P SL SW + DS+
Sbjct: 125 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 173
>AL589685-6|CAI14164.1| 406|Homo sapiens chromosome 1 open reading
frame 85 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +2
Query: 245 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 406
L++I+A + ++H +W G + V+ A +ST+ V W + + L ++
Sbjct: 56 LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 115
Query: 407 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 544
++ A+ +L E++ +V D P SL SW + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164
>AK075349-1|BAC11561.1| 406|Homo sapiens protein ( Homo sapiens
cDNA PSEC0030 fis, clone NT2RP1000567, highly similar to
Kidney predominant protein NCU-G1. ).
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +2
Query: 245 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 406
L++I+A + ++H +W G + V+ A +ST+ V W + + L ++
Sbjct: 56 LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 115
Query: 407 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 544
++ A+ +L E++ +V D P SL SW + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164
>AY358450-1|AAQ88815.1| 406|Homo sapiens RGSV2553 protein.
Length = 406
Score = 31.9 bits (69), Expect = 1.7
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +2
Query: 245 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 406
L++I+A + ++H +W G + V+ A +ST+ + W + + L ++
Sbjct: 56 LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSINWSLLLSPEPDGGLMVLPKDS 115
Query: 407 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 544
++ A+ +L E++ +V D P SL SW + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164
>AK125726-1|BAC86260.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ43738 fis, clone TESTI2014843. ).
Length = 572
Score = 30.7 bits (66), Expect = 3.9
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 577 VDSNHHLLVGEHAVDQGPRHILERHR---PLFALRADVALILHIIVFVELVYGNSEAILW 407
+D HL + E DQG R + E H+ P R L ++F +YG+ EAIL+
Sbjct: 272 LDGKTHLFILEGLADQGLRQLWENHQSWIPRSEHRKYKVLYNSQLLFRSRLYGDLEAILY 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,928,307
Number of Sequences: 237096
Number of extensions: 1762901
Number of successful extensions: 4160
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4160
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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