BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8a09
(643 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 4.7
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 24 4.7
AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposa... 23 6.2
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 8.2
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 8.2
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 8.2
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.8 bits (49), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 PGLILEYSQKGTIKNKEIDLLDLNTNSNIKEVAQHL-CTKEAL 267
P L LE + + +++LDL+TN NI + HL C+ L
Sbjct: 156 PELNLEIEADAFGQTRNLEVLDLSTN-NIWSLPDHLFCSLSGL 197
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.8 bits (49), Expect = 4.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 454 FCRSCPSNIFSQFCQRPHWLVAINVSVMSCRC 359
+ +SC S I C PH + I+ + + RC
Sbjct: 422 YAKSCTSEIKCAACNGPHRIGHISCARPAARC 453
>AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposase
protein.
Length = 336
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 270 HGRSERPIGAMSRHLKEENRTRRTGWQKILHLQDITDT 383
H E P+ + SR K+ R T W+ I ++I T
Sbjct: 11 HNYLENPLWSASRLAKKLKFPRNTVWRVIKRYKEILTT 48
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.0 bits (47), Expect = 8.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 89 KLYNFYNHYCIK 54
+L NFYNH C K
Sbjct: 303 ELTNFYNHSCTK 314
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 264 VNHGRSERPIGAMSRHLKEENRTRRTGWQKI 356
+ H S+ PIG RH++ R R G Q I
Sbjct: 2905 IMHKISQPPIGDHERHMQFLIRERMRGTQPI 2935
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 108 EVIEISPSILPSGIDI-GILAKRNDK 182
EVIE+ P LP G ++ GIL + +
Sbjct: 14 EVIELDPEQLPEGEEVLGILRQERSQ 39
Score = 23.0 bits (47), Expect = 8.2
Identities = 13/51 (25%), Positives = 19/51 (37%)
Frame = +1
Query: 274 DEVRDRLEQCLDTLKKRIEHEGPAGKRFYIYKTLQTHLLPLTNVAFDKTGK 426
DE +LEQ ++ K +H+ + T L FDK K
Sbjct: 467 DEAMSKLEQAIERAKIEAQHDAQYYDSISVSMTYNLARLYEAMAVFDKADK 517
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,390
Number of Sequences: 2352
Number of extensions: 14321
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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