Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8a05
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125964-6|AAD14755.2| 589|Caenorhabditis elegans Acid sphingom... 29 2.4
AC024845-3|AAF60852.1| 619|Caenorhabditis elegans Hypothetical ... 29 2.4
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 29 3.2
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 29 3.2
Z75531-2|CAA99804.2| 278|Caenorhabditis elegans Hypothetical pr... 27 9.9
U70854-2|AAO91721.1| 575|Caenorhabditis elegans Hypothetical pr... 27 9.9
U70854-1|AAB09146.1| 589|Caenorhabditis elegans Hypothetical pr... 27 9.9
AY728063-1|AAU43724.1| 278|Caenorhabditis elegans cadmium-induc... 27 9.9
AF031841-1|AAC13677.1| 601|Caenorhabditis elegans GLY7 protein. 27 9.9
AC006774-7|AAF60620.1| 601|Caenorhabditis elegans Glycosylation... 27 9.9
>AF125964-6|AAD14755.2| 589|Caenorhabditis elegans Acid
sphingomyelinase protein 3 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 598 YIYEHQTVIGIRANYKFVVFFSIYTHSWIFTTIYGNPDEYTS 473
Y + +I AN FF +THS F +Y NPD+Y S
Sbjct: 376 YALNYYKIINRYANTVVGQFFG-HTHSEKFYMMYANPDDYKS 416
>AC024845-3|AAF60852.1| 619|Caenorhabditis elegans Hypothetical
protein Y65B4BL.2 protein.
Length = 619
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 207 HFSLIHSQVHKGFLLLKLQLENVTRICNPSTR*YLDTSIIPQNI 76
HFS I S H GFL+ +LQ + R S L T ++P +I
Sbjct: 293 HFSAIWSMQHNGFLIYELQPVPLLRQHVTSVNGNLLTRVVPASI 336
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 137 VTFSNCSFRSKNPLWTWECINEKCV--PSRPDPTNKLQSLETCNMLCAGG 280
V FS SF+S++ L T + E+ P+ P+PT LQ T + AGG
Sbjct: 55 VRFSQFSFQSRDDLTTIDDEEEEEYRKPAPPEPTKFLQVSRTTVRMLAGG 104
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 137 VTFSNCSFRSKNPLWTWECINEKCV--PSRPDPTNKLQSLETCNMLCAGG 280
V FS SF+S++ L T + E+ P+ P+PT LQ T + AGG
Sbjct: 55 VRFSQFSFQSRDDLTTIDDEEEEEYRKPAPPEPTKFLQVSRTTVRMLAGG 104
>Z75531-2|CAA99804.2| 278|Caenorhabditis elegans Hypothetical
protein C54D10.2 protein.
Length = 278
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 362 ILLTPSRTVQEYLQESFELFREDVKRLEQSAFG 460
IL +T+Q+YL E LF ++VK + + FG
Sbjct: 204 ILHRDLQTIQDYLGEQKFLFGDEVKAADAAVFG 236
>U70854-2|AAO91721.1| 575|Caenorhabditis elegans Hypothetical
protein F38A5.1b protein.
Length = 575
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 152 CSFRSKNPLWTWECIN---EKCVPSRPDPTNKLQSLETCNMLCAGGQIW 289
C++RS +W+W +N +K VPS + L ++ G + W
Sbjct: 407 CAYRSFQTIWSWFILNGYTDKPVPSHREIQQALVDIQDKQAKFVGSRQW 455
>U70854-1|AAB09146.1| 589|Caenorhabditis elegans Hypothetical
protein F38A5.1a protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 152 CSFRSKNPLWTWECIN---EKCVPSRPDPTNKLQSLETCNMLCAGGQIW 289
C++RS +W+W +N +K VPS + L ++ G + W
Sbjct: 421 CAYRSFQTIWSWFILNGYTDKPVPSHREIQQALVDIQDKQAKFVGSRQW 469
>AY728063-1|AAU43724.1| 278|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-3 protein.
Length = 278
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 362 ILLTPSRTVQEYLQESFELFREDVKRLEQSAFG 460
IL +T+Q+YL E LF ++VK + + FG
Sbjct: 204 ILHRDLQTIQDYLGEQKFLFGDEVKAADAAVFG 236
>AF031841-1|AAC13677.1| 601|Caenorhabditis elegans GLY7 protein.
Length = 601
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 544 VFFSIYTHSWIFTTIYGNPDEYTSPLFE 461
V I ++SW + ++YG+P+ + S +FE
Sbjct: 277 VIDGIDSNSWEYRSVYGSPNAHHSGIFE 304
>AC006774-7|AAF60620.1| 601|Caenorhabditis elegans Glycosylation
related protein 7 protein.
Length = 601
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 544 VFFSIYTHSWIFTTIYGNPDEYTSPLFE 461
V I ++SW + ++YG+P+ + S +FE
Sbjct: 277 VIDGIDSNSWEYRSVYGSPNAHHSGIFE 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,580,097
Number of Sequences: 27780
Number of extensions: 401756
Number of successful extensions: 934
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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