Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a04
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6C7C Cluster: PREDICTED: similar to mitochondr...    44   0.003
UniRef50_Q2VKI7 Cluster: Tes14; n=3; mulleri subgroup|Rep: Tes14...    42   0.011
UniRef50_A0NGR0 Cluster: ENSANGP00000031145; n=2; Culicidae|Rep:...    40   0.059
UniRef50_Q6CR63 Cluster: Similar to sp|P19955 Saccharomyces cere...    36   0.96 
UniRef50_Q4FR21 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q753R6 Cluster: AFR260Cp; n=1; Eremothecium gossypii|Re...    35   2.2  
UniRef50_UPI0000F2015F Cluster: PREDICTED: hypothetical protein;...    33   5.1  
UniRef50_Q7S3Z3 Cluster: Predicted protein; n=4; Sordariomycetes...    33   5.1  
UniRef50_A7T177 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.8  
UniRef50_A7TS69 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_UPI00015A6A2B Cluster: UPI00015A6A2B related cluster; n...    33   9.0  

>UniRef50_UPI0000DB6C7C Cluster: PREDICTED: similar to mitochondrial
           ribosomal protein S36; n=2; Apocrita|Rep: PREDICTED:
           similar to mitochondrial ribosomal protein S36 - Apis
           mellifera
          Length = 95

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
 Frame = +1

Query: 118 IILNRIPVIKFRKGGAS--HVXXXXXXXXXXXXXXXXXXXV--QSQPAAA----MSTGAI 273
           ++   +P+IKFRKGG    +V                   +  Q+ P+A     +    I
Sbjct: 8   VVKPHVPLIKFRKGGIQKGNVKEKLLNTTSNPPSKHLDSAMLEQNNPSATGPNVVVLPTI 67

Query: 274 PDIDLPARYKRQPLSEEEIAYINGGG 351
            D+ LPAR++R+P+ E+EIAYIN GG
Sbjct: 68  EDLYLPARFQRRPIDEKEIAYINRGG 93


>UniRef50_Q2VKI7 Cluster: Tes14; n=3; mulleri subgroup|Rep: Tes14 -
           Drosophila mulleri (Fruit fly)
          Length = 80

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +1

Query: 103 MVRLSII--LNRIPVIKFRKGGASHVXXXXXXXXXXXXXXXXXXXVQSQPAAAMSTGAIP 276
           MVRL+I+    R+P+I+FRKGG +                       S         AI 
Sbjct: 1   MVRLNIVRLTKRVPLIQFRKGGPALTNKPAASQQASSK--------DSGGKKTSGGPAIE 52

Query: 277 DIDLPARYKRQPLSEEEIAYINGGGI 354
           D +LPAR+ R+P+   E  YIN GGI
Sbjct: 53  DWELPARFARKPIDPLEAEYINNGGI 78


>UniRef50_A0NGR0 Cluster: ENSANGP00000031145; n=2; Culicidae|Rep:
           ENSANGP00000031145 - Anopheles gambiae str. PEST
          Length = 84

 Score = 39.9 bits (89), Expect = 0.059
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
 Frame = +1

Query: 103 MVRLSIILN---RIPVIKFRKGGASHVXXXXXXXXXXXXXXXXXXXVQSQPAAAMSTG-A 270
           MV L  +L+   R+P+IKFRKGG                            A ++S+G A
Sbjct: 1   MVMLRSVLSSAKRVPLIKFRKGGPFQ------EAASHTAGGAAANTAAPAHARSVSSGEA 54

Query: 271 IPDIDLPARYKRQPLSEEEIAYINGGG 351
           I +  LPARY+R+P+ + E+  IN GG
Sbjct: 55  IEEWQLPARYRRKPIDDVEMDCINRGG 81


>UniRef50_Q6CR63 Cluster: Similar to sp|P19955 Saccharomyces
           cerevisiae YFR049w YMR31 ribosomal protein; n=1;
           Kluyveromyces lactis|Rep: Similar to sp|P19955
           Saccharomyces cerevisiae YFR049w YMR31 ribosomal protein
           - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 133

 Score = 35.9 bits (79), Expect = 0.96
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +1

Query: 235 QSQPAAAMSTGAIPDIDLPARYKRQPLSEEEIAYINGGGI 354
           +++P      G+I    LP R+K +P+ E+EI  INGGGI
Sbjct: 96  KNRPLEENEVGSISQ--LPPRFKLRPMDEQEIEIINGGGI 133


>UniRef50_Q4FR21 Cluster: Putative uncharacterized protein; n=1;
           Psychrobacter arcticus|Rep: Putative uncharacterized
           protein - Psychrobacter arcticum
          Length = 429

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +1

Query: 415 VEIDSVDIFCYIELND*KYYNL 480
           VE D+VD++CYIELN+  YY++
Sbjct: 317 VERDNVDVYCYIELNNRLYYSI 338


>UniRef50_Q753R6 Cluster: AFR260Cp; n=1; Eremothecium gossypii|Rep:
           AFR260Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 119

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 280 IDLPARYKRQPLSEEEIAYINGGGI 354
           +DLPARY+ +PL + E+  IN GGI
Sbjct: 94  LDLPARYRTRPLEDAEMECINQGGI 118


>UniRef50_UPI0000F2015F Cluster: PREDICTED: hypothetical protein;
           n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 1973

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 204 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 353
           + C YC  PCAKP+        +T  RP   +    + + +  LY+ R++
Sbjct: 131 YVCTYCGRPCAKPSVLQKHIRSHTGERPYPCVPCGFSFKTKSNLYKHRKS 180


>UniRef50_Q7S3Z3 Cluster: Predicted protein; n=4;
           Sordariomycetes|Rep: Predicted protein - Neurospora
           crassa
          Length = 130

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +1

Query: 283 DLPARYKRQPLSEEEIAYINGG 348
           DLPAR++RQPL+E EI  I  G
Sbjct: 105 DLPARFRRQPLTEAEIEAIESG 126


>UniRef50_A7T177 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 121

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 213 CYCWNPCAKPACCSNEYWCY 272
           C+C+  CA    C+ EYWCY
Sbjct: 89  CWCYQSCACYQSCALEYWCY 108


>UniRef50_A7TS69 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 126

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 241 QPAAAMSTGAIPDIDLPARYKRQPLSEEEIAYINGGGIV 357
           +P  A    AI +  LPAR++ +P+ E E+  INGGG +
Sbjct: 90  RPLMAGEVSAISE--LPARFRFKPMDEAELDSINGGGAI 126


>UniRef50_UPI00015A6A2B Cluster: UPI00015A6A2B related cluster; n=1;
           Danio rerio|Rep: UPI00015A6A2B UniRef100 entry - Danio
           rerio
          Length = 479

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +3

Query: 207 CCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTT 314
           CCCY   PC    CC  E     +HR     Q   T
Sbjct: 205 CCCYVRCPCCPQTCCCPEKAAVMQHRLMKEAQRAMT 240


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,805,605
Number of Sequences: 1657284
Number of extensions: 7496518
Number of successful extensions: 16239
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16196
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)