Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7p21
         (298 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0014 - 15403508-15403648,15404091-15404204,15404253-154043...    27   3.5  

>06_03_0014 -
           15403508-15403648,15404091-15404204,15404253-15404339,
           15404448-15404577,15404693-15404934,15410335-15410400
          Length = 259

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 102 KEICIELEALGVYXTRLQDCLASLQANALNICRKCL 209
           KEI +EL+A  +    LQ+ L  L+A AL   R C+
Sbjct: 185 KEIQVELDAKKLESAVLQEELERLKAQALENYRHCI 220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,608,701
Number of Sequences: 37544
Number of extensions: 76860
Number of successful extensions: 134
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 327448548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)