Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7p18
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0128 - 31879286-31879381,31879463-31879574,31879680-318797...   107   1e-23
03_06_0371 + 33435936-33436472,33436554-33436741,33437146-334372...    31   0.83 
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541...    30   1.9  
11_02_0137 - 8702661-8703495,8703820-8704628                           28   5.9  
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239...    28   5.9  

>03_06_0128 -
           31879286-31879381,31879463-31879574,31879680-31879747,
           31880959-31881072,31881207-31881247,31881340-31881393,
           31881785-31881866,31882063-31882116
          Length = 206

 Score =  107 bits (256), Expect = 1e-23
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +1

Query: 529 INYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITI 669
           INYPFEKGPLSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITI
Sbjct: 78  INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 124



 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 574 GEHALRRYPSGEERCIACKLCEAICPAQAI 663
           G     RY     +CI C  C+  CP  AI
Sbjct: 132 GSRRTTRYDIDMTKCIYCGFCQEACPVDAI 161


>03_06_0371 +
           33435936-33436472,33436554-33436741,33437146-33437245,
           33437360-33437545,33438977-33439186,33439772-33439959,
           33440083-33440341
          Length = 555

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +1

Query: 328 AQYSSSSEGNVEKVYPQNIPGYKYVNAEEQDMSFRAMSDRAAQTMFWT-ELARGFAVTLA 504
           A Y S  + N+   YP++ P YK +   ++   F  + D +  T+F   +L  G+ V + 
Sbjct: 189 ASYPSVVQNNILWFYPRSEPEYKEILQRKRPPYFPDLDDPSFNTVFGVRDLFYGYDVLVE 248

Query: 505 HIFKEPATINY 537
           ++  +PA + Y
Sbjct: 249 NLM-DPAHVPY 258


>02_02_0464 -
           10552347-10552466,10552683-10552928,10553866-10554135,
           10554231-10554413,10554493-10554688,10554775-10555079,
           10555515-10555604,10555689-10555806,10555991-10556088,
           10556187-10556272,10557622-10557736
          Length = 608

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 607 EERCIACKLCEAICPAQAITI 669
           EE CI C +C  +CP  AI I
Sbjct: 56  EELCIGCGICVKVCPFDAIQI 76


>11_02_0137 - 8702661-8703495,8703820-8704628
          Length = 547

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 426 RHVLFLCIHIFISRYVLW 373
           RH+L LCI +F++ Y  W
Sbjct: 120 RHLLNLCIQVFLALYAFW 137


>02_01_0336 +
           2397648-2397812,2398367-2398441,2398860-2398975,
           2399155-2399269,2399360-2399488,2399809-2399856,
           2400369-2400448,2400628-2400824,2400916-2401202,
           2401281-2401307,2401353-2401538,2401633-2402094,
           2402201-2402350,2402612-2402687,2402851-2402978,
           2403244-2403435,2403559-2403690,2403767-2403889,
           2404128-2404346,2404518-2404679
          Length = 1022

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 328 AQYSSSSEGNVEKVYPQNIPGYKYVNAEEQDMSFRAMSDRAAQTMFW 468
           +Q   + + N+E++ P+     + V AEE+D   RA + +A   M W
Sbjct: 156 SQVDGTYQFNLEELVPKLCELAQIVKAEEKDNMLRASTLQALSAMIW 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,091,212
Number of Sequences: 37544
Number of extensions: 284470
Number of successful extensions: 498
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)