Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7p07
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831 59 3e-09
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701... 55 6e-08
06_03_0907 - 25851673-25852368,25853531-25853585,25853973-258540... 51 1e-06
03_02_0040 + 5221015-5221322,5221423-5222254 45 5e-05
02_01_0595 + 4420112-4420401,4420518-4420607,4421883-4421931,442... 44 9e-05
06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781 44 1e-04
04_04_0909 - 29312875-29313135,29313235-29313556,29313676-293139... 31 0.67
08_02_1583 + 28036125-28037030,28037411-28037656 31 0.88
03_02_0322 + 7448046-7448135,7448402-7448515,7449119-7449437,744... 29 3.5
10_08_0858 - 21108283-21108387,21108820-21108889,21109490-211096... 29 4.7
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 4.7
12_02_0189 + 15165485-15168694 28 6.2
10_08_0757 + 20367348-20367560,20367657-20367904,20371406-203717... 28 6.2
03_01_0154 - 1223879-1224274,1224391-1224585 28 6.2
01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320 28 6.2
11_04_0406 - 17334172-17334537,17334803-17334887,17334892-17335091 28 8.2
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 28 8.2
>12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831
Length = 418
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 401 FRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAIY 574
+ LP WL+DN+++H +R P SIF IH ET N+WTHL+G + F+ +AI+
Sbjct: 47 YEELPEWLKDNEFIHGYYRCEWP-MKETILSIFSIHNETLNVWTHLIGFLLFLCLAIF 103
>03_02_0270 -
7011363-7012302,7013237-7013640,7014264-7014333,
7014835-7015331,7015959-7016283,7018060-7018292
Length = 822
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/107 (28%), Positives = 56/107 (52%)
Frame = +2
Query: 290 AGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLP 469
A +E++ A A ++ +E +R+ + + +R LP +++DN+Y+ + +R P
Sbjct: 2 AAAAGEEVEAARWAE-AEDERKEGLRR--RRRYGLVEYRALPGYMRDNEYILRHYRCEWP 58
Query: 470 SFSACFASIFRIHTETGNIWTHLLGCVAFIGVAIYFLSRPSIEIQMQ 610
S F IH ET N+WTHL+G F+ + IY ++ + +Q
Sbjct: 59 -LPQVLLSAFSIHNETLNVWTHLIGFFIFLVLTIYTATQVPNVVDLQ 104
>06_03_0907 -
25851673-25852368,25853531-25853585,25853973-25854068,
25854170-25854435
Length = 370
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 401 FRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAIYFL 580
+ LP ++++N+++ +R P +A S+F H ET NIWTHLLG V F G+ + L
Sbjct: 47 YHELPDYMKENEFILDYYRSEWPILNALL-SLFSWHNETINIWTHLLGFVLFFGLTVLHL 105
Query: 581 SR 586
+
Sbjct: 106 GQ 107
>03_02_0040 + 5221015-5221322,5221423-5222254
Length = 379
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 365 RKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLG 544
++ E + + + LP +L+ N+++ +R P A S F +H ET N+WTHL+G
Sbjct: 49 KRCCERKYELVSYDALPAFLKHNEFIIDYYRSEWPIKQALL-SAFAVHNETVNVWTHLIG 107
Query: 545 CVAFIGVAI 571
F+ + +
Sbjct: 108 FFMFLALTV 116
>02_01_0595 +
4420112-4420401,4420518-4420607,4421883-4421931,
4423337-4424020
Length = 370
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 338 AAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTET 517
AAE A E R++ + + LP +L+DN+++ +R P A S F H ET
Sbjct: 39 AAEAAAERGRRL-----RLVGYDELPDFLRDNEFIRGYYRAEWPLRDAAL-SAFSWHNET 92
Query: 518 GNIWTHLLGCVAFIGVAI 571
N+WTHL G + F+ +A+
Sbjct: 93 LNVWTHLGGFLLFLALAL 110
>06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781
Length = 389
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 401 FRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAI 571
F LP +L+DN+++ +GH S S F H ET N+WTHL G F+ +A+
Sbjct: 70 FEELPDYLKDNEFI-RGHYRCEWSVRDALRSAFAWHNETLNVWTHLGGFFLFLWLAV 125
>04_04_0909 -
29312875-29313135,29313235-29313556,29313676-29313923,
29314032-29314259
Length = 352
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 273 WLKF*KLACYPMRLIWEHWPITPPNRPRNSFAKYGRRRGTCAI 401
W F +L CYP+ + WP PP+ R Y R A+
Sbjct: 133 WRDFLRLHCYPLESFIDQWPSNPPSF-RQVVGTYSREARALAL 174
>08_02_1583 + 28036125-28037030,28037411-28037656
Length = 383
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 273 WLKF*KLACYPMRLIWEHWPITP 341
W F KLAC P+ + E WP +P
Sbjct: 169 WRDFLKLACMPLAAVVESWPTSP 191
>03_02_0322 +
7448046-7448135,7448402-7448515,7449119-7449437,
7449519-7450453
Length = 485
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 356 PRPVRRRYGPVLPNQSH-RITRQLSKLQPFRHPTDVDPPVLK 234
P +R P+LP++ H TR +K+ +V PP+LK
Sbjct: 310 PAKASQRIDPLLPSKVHIDATRSFTKVSQTEIKPEVQPPILK 351
>10_08_0858 -
21108283-21108387,21108820-21108889,21109490-21109646,
21109930-21110062,21110409-21110583,21113353-21113453,
21113620-21113706,21115871-21115931,21116114-21116178,
21116534-21117631
Length = 683
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +3
Query: 303 PMRLIWEHWPITPPNRPRNSFAKYGRRRGTCAISDICHVGYKTTIIYTKDID 458
P RL W HW +T + G+ G + D ++ T I ++D
Sbjct: 504 PDRLRWAHWRVTGEPQCAAGAVAIGQASGHTGVRDTAGANWQETCIVVTEMD 555
>02_01_0084 -
573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 293 GVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHL 412
G L+ D G + AA++A F+ VW WN+C R L
Sbjct: 274 GDLNRVCDSGPVMEKAAKEATMFL--VWIIGWNICLLRLL 311
>12_02_0189 + 15165485-15168694
Length = 1069
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 113 SVSSDGLRRRQGWDPD 160
+V S GLRRR WDPD
Sbjct: 767 TVDSVGLRRRTAWDPD 782
>10_08_0757 +
20367348-20367560,20367657-20367904,20371406-20371730,
20372299-20372541
Length = 342
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 273 WLKF*KLACYPMRLIWEHWPITPPN 347
W + +L CYP+ WP PP+
Sbjct: 128 WRDYLRLHCYPLHQFVPDWPSNPPS 152
>03_01_0154 - 1223879-1224274,1224391-1224585
Length = 196
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 273 WLKF*KLACYPMRLIWEHWPITPPN 347
W + +L CYP+ WP PP+
Sbjct: 122 WRDYLRLHCYPLHRYLPDWPSNPPS 146
>01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320
Length = 463
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 290 AGVLSDEIDLGALAHNAAEQAEEFVRKVWE---ASWNVCHFR-HLPRWL 424
AG L DE +LGA E+ + R +W+ WN H L W+
Sbjct: 37 AGELGDEGELGARRARRGEEVQRRFRLLWKFRCVKWNFSHMEVQLMDWM 85
>11_04_0406 - 17334172-17334537,17334803-17334887,17334892-17335091
Length = 216
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 1 GSCTANKGHGGQWLPISHLRVIETSEDVGSG 93
G+ + G GG+W I L E ED G+G
Sbjct: 120 GNASVRLGGGGRWWHIRRLGATEDGEDDGAG 150
>01_06_1164 - 35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 526 LDASPWLRGIHWRRDLLSVSSIYRNSNARESYIRCFFCRRYRMP 657
L ASP+ G WR+ I N+N SY RC + R R P
Sbjct: 1313 LTASPYDDGYQWRK--YGQKKI-NNTNFPRSYYRCSYHRERRCP 1353
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,853,434
Number of Sequences: 37544
Number of extensions: 470188
Number of successful extensions: 1380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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