Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7p07
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...   157   7e-39
AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...   156   1e-38
AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical ...    54   1e-07
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    31   0.60 
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.60 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.60 
U64854-3|AAB18315.2|  304|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81100-2|CAB03192.2|  332|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81500-4|CAB04097.1|  254|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z92829-6|CAB07346.1|  214|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily ass...    27   9.8  

>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score =  157 bits (381), Expect = 7e-39
 Identities = 71/131 (54%), Positives = 88/131 (67%)
 Frame = +2

Query: 305 DEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSAC 484
           DE+++  +  + +EQ    V K +EA W V  + HLP WLQDN++L  GHRPPLPSFS C
Sbjct: 133 DELEVD-VKEDRSEQTG-IVTKTYEARWKVLKYEHLPEWLQDNEFLRHGHRPPLPSFSEC 190

Query: 485 FASIFRIHTETGNIWTHLLGCVAFIGVAIYFLSRPSIEIQMQEKXXXXXXXXXXXXCLGF 664
           F SI+ +HTETGNIWTHL+GCVAF  +A +FL+RP   IQ QEK            CLG 
Sbjct: 191 FKSIWSLHTETGNIWTHLIGCVAFFFLACWFLTRPDNHIQFQEKVVFSFFFAGAVLCLGL 250

Query: 665 SFAYHTLYCHS 697
           SFA+HTL CHS
Sbjct: 251 SFAFHTLSCHS 261


>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score =  156 bits (379), Expect = 1e-38
 Identities = 68/148 (45%), Positives = 91/148 (61%)
 Frame = +2

Query: 254 HLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDN 433
           HL  ++  + L+  +  +E+    +     E     +++ WEA W   +F  LP WLQDN
Sbjct: 227 HLDHSDDDDELEVEINEEEV---IIPSETGEGPRAVIKRFWEARWKATNFETLPEWLQDN 283

Query: 434 DYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAIYFLSRPSIEIQMQE 613
           +YL  GHRPPLPSFS+CF SIF +HTETGNIWTH+ GCVAF G+ I+FL+RP  ++Q  E
Sbjct: 284 EYLRTGHRPPLPSFSSCFKSIFALHTETGNIWTHMYGCVAFFGIGIWFLTRPHDQMQWVE 343

Query: 614 KXXXXXXXXXXXXCLGFSFAYHTLYCHS 697
           K            CLG SF +HT+ CHS
Sbjct: 344 KLIYSAFFLGAVICLGMSFLFHTVACHS 371


>AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical
           protein Y67A10A.8 protein.
          Length = 328

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
 Frame = +2

Query: 410 LPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFI--GVAIYFLS 583
           L + L  NDY+   +RPP  +   C  S F I+ ET NIW+HLLG + F        ++ 
Sbjct: 28  LHKTLWQNDYVINHYRPPAMTKKMCAKSAFHINNETINIWSHLLGFIYFTYQQYNTNYIV 87

Query: 584 RPSIEIQMQEKXXXXXXXXXXXXCLGFSFAYHTLYCHS 697
            PSI     +             C+  S +YHT  C S
Sbjct: 88  LPSIGSHPSDHFVFTLSIFGMQMCMLLSASYHTFGCTS 125


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 107 IQYQIPLPTSSLVSITRRWEIGNHWPP 27
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 107 IQYQIPLPTSSLVSITRRWEIGNHWPP 27
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 107 IQYQIPLPTSSLVSITRRWEIGNHWPP 27
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>U64854-3|AAB18315.2|  304|Caenorhabditis elegans Hypothetical
           protein K11C4.2 protein.
          Length = 304

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 449 GHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFI 559
           G+RP     S  F S F  H E  N+WTH +  +  +
Sbjct: 20  GYRPLNQPPSFYFRSAFSSHNEVFNVWTHFIPAIILL 56


>Z81100-2|CAB03192.2|  332|Caenorhabditis elegans Hypothetical
           protein K08G2.5 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +3

Query: 483 VLHQFSESTLRQVTFG----RISLAAWHSLASRSTFCLVHLSKFKCKRKLYSVFFLSALS 650
           +L +F   +L QV  G     + +A          + L++  K+   RKLY + F +A +
Sbjct: 86  ILKRFGVPSLAQVYMGVCLLEVMIATIVIFLEDRRYRLINGQKYSTMRKLYRLLFATAYA 145

Query: 651 YASVFLLPI 677
            A  F +PI
Sbjct: 146 LALTFPVPI 154


>Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical
           protein F11D11.8 protein.
          Length = 221

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 627 VFFLSALSYASVFLLPITHC 686
           + FLS+  Y SVFLLP T C
Sbjct: 1   MIFLSSFFYFSVFLLPFTSC 20


>Z81500-4|CAB04097.1|  254|Caenorhabditis elegans Hypothetical
           protein F11D11.5 protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 627 VFFLSALSYASVFLLPITHC 686
           + FLS+  Y SVFLLP T C
Sbjct: 1   MIFLSSFFYFSVFLLPFTSC 20


>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 110 GIQYQIPLPTSSLVSITRRWEIGNHWPP 27
           G+ YQ PLP+S+++   R+ E     PP
Sbjct: 238 GLDYQRPLPSSTILPFLRKMEYDARQPP 265


>U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical
           protein F46H5.7b protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +2

Query: 245 EDQHLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWL 424
           E+Q   DA   EV    V + E+ LG LA+N+  QAE   +++ EA+W       + +  
Sbjct: 285 ENQLNSDAH-EEVKSTAVRALEVKLG-LANNSIRQAEAEKQQLQEANWYA--NERVGKLE 340

Query: 425 QDNDYL 442
           Q+N YL
Sbjct: 341 QENGYL 346


>U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical
           protein F46H5.7a protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +2

Query: 245 EDQHLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWL 424
           E+Q   DA   EV    V + E+ LG LA+N+  QAE   +++ EA+W       + +  
Sbjct: 285 ENQLNSDAH-EEVKSTAVRALEVKLG-LANNSIRQAEAEKQQLQEANWYA--NERVGKLE 340

Query: 425 QDNDYL 442
           Q+N YL
Sbjct: 341 QENGYL 346


>Z92829-6|CAB07346.1|  214|Caenorhabditis elegans Hypothetical
           protein F10A3.7 protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 488 ASIFRIHTETGNIWTHLLGCVAFIGVAI-YFLSRPS 592
           + + R   +T  IW   + C+AF+  ++ YF++ PS
Sbjct: 127 SGLLRFSNKTAPIWMLFIFCIAFLWFSLCYFVNGPS 162


>U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 257 protein.
          Length = 570

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 356 PRPVRRRYGPVLPNQSHRITRQLSKLQPFRHPTDVDP 246
           PRP      P L  ++HR  +Q  K  P R PT   P
Sbjct: 382 PRPGHPSTSPKLVPKTHRSNQQQEKNAPPRPPTTASP 418


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,147,373
Number of Sequences: 27780
Number of extensions: 377465
Number of successful extensions: 1072
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)