Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7p07
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +2

Query: 545 CVAFIGVAIYFLSRPSIEI 601
           C++ + + +Y++S P I +
Sbjct: 178 CISILAIKVYYISCPEISV 196


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 374 ILCERIPRPVRRRYGP 327
           ILC   P  VRRRY P
Sbjct: 404 ILCACCPGRVRRRYQP 419


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 350 PVRRRYGPVLPNQS 309
           P+   YGPV+P QS
Sbjct: 648 PLNVPYGPVIPEQS 661


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 101 IGSQSVSSDGLRRR 142
           +G Q+ + DGLRRR
Sbjct: 425 VGEQARAQDGLRRR 438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,757
Number of Sequences: 438
Number of extensions: 4668
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)