Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7o20
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047527-1|AAH47527.1| 824|Homo sapiens mitogen-activated prote... 31 2.5
AF218778-1|AAF32323.1| 797|Homo sapiens islet-brain 2 protein. 31 2.5
AF136382-1|AAF00980.1| 824|Homo sapiens JNK MAP kinase scaffold... 31 2.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 3.3
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 3.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 3.3
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 3.3
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 3.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 3.3
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 31 4.4
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 31 4.4
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 31 4.4
AL359878-1|CAI13660.1| 338|Homo sapiens La ribonucleoprotein do... 31 4.4
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 31 4.4
AL157709-3|CAI39595.1| 338|Homo sapiens La ribonucleoprotein do... 31 4.4
AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA 62... 31 4.4
AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein. 31 4.4
AK056290-1|BAB71140.1| 235|Homo sapiens protein ( Homo sapiens ... 30 7.7
>BC047527-1|AAH47527.1| 824|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 2 protein.
Length = 824
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/111 (24%), Positives = 49/111 (44%)
Frame = +2
Query: 200 TGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECV 379
+G + N I ++ P ++ +P +P R P+ L G DD + + G E E
Sbjct: 287 SGRSSHLTNSIEEASSPASEPEPPREPP---RRPAFLPVGP---DDTNSEYESGSESEPD 340
Query: 380 NYYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITP 532
L A++ + +N++ + G CL+P RPP +P++P
Sbjct: 341 ---LSEDADSPWLL--SNLVSRMISEGSSPIRCPGQCLSPAPRPPGEPVSP 386
>AF218778-1|AAF32323.1| 797|Homo sapiens islet-brain 2 protein.
Length = 797
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/111 (24%), Positives = 49/111 (44%)
Frame = +2
Query: 200 TGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECV 379
+G + N I ++ P ++ +P +P R P+ L G DD + + G E E
Sbjct: 260 SGRSSHLTNSIEEASSPASEPEPPREPP---RRPAFLPVGP---DDTNSEYESGSESEPD 313
Query: 380 NYYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITP 532
L A++ + +N++ + G CL+P RPP +P++P
Sbjct: 314 ---LSEDADSPWLL--SNLVSRMISEGSSPIRCPGQCLSPAPRPPGEPVSP 359
>AF136382-1|AAF00980.1| 824|Homo sapiens JNK MAP kinase scaffold
protein JIP2 protein.
Length = 824
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/111 (24%), Positives = 49/111 (44%)
Frame = +2
Query: 200 TGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECV 379
+G + N I ++ P ++ +P +P R P+ L G DD + + G E E
Sbjct: 287 SGRSSHLTNSIEEASSPASEPEPPREPP---RRPAFLPVGP---DDTNSEYESGSESEPD 340
Query: 380 NYYLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITP 532
L A++ + +N++ + G CL+P RPP +P++P
Sbjct: 341 ---LSEDADSPWLL--SNLVSRMISEGSSPIRCPGQCLSPAPRPPGEPVSP 386
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.1 bits (67), Expect = 3.3
Identities = 33/104 (31%), Positives = 44/104 (42%)
Frame = +3
Query: 228 RSSHQRSPQRNCSRSRSLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI 407
R S RSP R SRSRS +G R A R R+R P A++G + + T A R
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPA--RRGRSRSRTP-ARRGRSRSRTPARRSG 679
Query: 408 TP*SLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGR 539
S T S R R+ + ++ R + P R GR
Sbjct: 680 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR 723
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 3.3
Identities = 33/104 (31%), Positives = 44/104 (42%)
Frame = +3
Query: 228 RSSHQRSPQRNCSRSRSLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI 407
R S RSP R SRSRS +G R A R R+R P A++G + + T A R
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPA--RRGRSRSRTP-ARRGRSRSRTPARRSG 679
Query: 408 TP*SLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGR 539
S T S R R+ + ++ R + P R GR
Sbjct: 680 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR 723
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.1 bits (67), Expect = 3.3
Identities = 33/104 (31%), Positives = 44/104 (42%)
Frame = +3
Query: 228 RSSHQRSPQRNCSRSRSLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI 407
R S RSP R SRSRS +G R A R R+R P A++G + + T A R
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPA--RRGRSRSRTP-ARRGRSRSRTPARRSG 679
Query: 408 TP*SLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGR 539
S T S R R+ + ++ R + P R GR
Sbjct: 680 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR 723
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.1 bits (67), Expect = 3.3
Identities = 33/104 (31%), Positives = 44/104 (42%)
Frame = +3
Query: 228 RSSHQRSPQRNCSRSRSLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI 407
R S RSP R SRSRS +G R A R R+R P A++G + + T A R
Sbjct: 588 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPA--RRGRSRSRTP-ARRGRSRSRTPARRSG 644
Query: 408 TP*SLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGR 539
S T S R R+ + ++ R + P R GR
Sbjct: 645 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR 688
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.1 bits (67), Expect = 3.3
Identities = 33/104 (31%), Positives = 44/104 (42%)
Frame = +3
Query: 228 RSSHQRSPQRNCSRSRSLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI 407
R S RSP R SRSRS +G R A R R+R P A++G + + T A R
Sbjct: 413 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPA--RRGRSRSRTP-ARRGRSRSRTPARRSG 469
Query: 408 TP*SLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGR 539
S T S R R+ + ++ R + P R GR
Sbjct: 470 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR 513
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 3.3
Identities = 33/104 (31%), Positives = 44/104 (42%)
Frame = +3
Query: 228 RSSHQRSPQRNCSRSRSLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI 407
R S RSP R SRSRS +G R A R R+R P A++G + + T A R
Sbjct: 671 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPA--RRGRSRSRTP-ARRGRSRSRTPARRSG 727
Query: 408 TP*SLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGR 539
S T S R R+ + ++ R + P R GR
Sbjct: 728 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR 771
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 470 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 568
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 662 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 693
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 470 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 568
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 470 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 568
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL359878-1|CAI13660.1| 338|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 338
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 470 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 568
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 249 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 280
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 470 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 568
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL157709-3|CAI39595.1| 338|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 338
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 470 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 568
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 249 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 280
>AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA
628-1308] protein.
Length = 681
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 326 TNDDLSCQTSDGQEGECVNYYLCNAAN-NTIITDGTNVIDIRVGSGPCSSYIDVCCLA-P 499
T+ SCQ+S Q + L N + +T+ + D VG GP V L P
Sbjct: 128 TSSGSSCQSSSSQPERGPSPSLLNTISLDTMPKFAFSSEDEGVGPGPAGPKRPVFILGEP 187
Query: 500 DQRPPTDPITPRPETL 547
D P P+ P+P +L
Sbjct: 188 DPPPAATPVMPKPSSL 203
>AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein.
Length = 1308
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 326 TNDDLSCQTSDGQEGECVNYYLCNAAN-NTIITDGTNVIDIRVGSGPCSSYIDVCCLA-P 499
T+ SCQ+S Q + L N + +T+ + D VG GP V L P
Sbjct: 755 TSSGSSCQSSSSQPERGPSPSLLNTISLDTMPKFAFSSEDEGVGPGPAGPKRPVFILGEP 814
Query: 500 DQRPPTDPITPRPETL 547
D P P+ P+P +L
Sbjct: 815 DPPPAATPVMPKPSSL 830
>AK056290-1|BAB71140.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ31728 fis, clone NT2RI2006788. ).
Length = 235
Score = 29.9 bits (64), Expect = 7.7
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Frame = +2
Query: 248 PPTQLQPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQ---EGECVNYYLCNAANNTII 418
PP Q P T P A L P V L +TS G C + A + +
Sbjct: 11 PPAQQAPQTLPGPPGLAQLPLPPEVPPGSHLCVETSSWTIPWTGACPAVAVEQAGGSCRL 70
Query: 419 T-DGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPTDPITPRP 538
+ +GS PCS +C P + P TP P
Sbjct: 71 QLRSQDPSPAGMGSSPCSPAHHLCMQLTATAPSSAPRTPTP 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,722,725
Number of Sequences: 237096
Number of extensions: 2181180
Number of successful extensions: 8308
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8270
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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