BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7o15
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK075118-1|BAC11413.1| 246|Homo sapiens protein ( Homo sapiens ... 38 0.052
AB046767-1|BAB13373.1| 863|Homo sapiens KIAA1547 protein protein. 35 0.36
S53149-1|ABB72474.1| 391|Homo sapiens casein kinase II-alpha su... 33 1.5
M55265-1|AAA35503.1| 391|Homo sapiens casein kinase II alpha su... 33 1.5
J02853-1|AAA56821.1| 391|Homo sapiens casein kinase II alpha su... 33 1.5
BT019792-1|AAV38595.1| 391|Homo sapiens casein kinase 2, alpha ... 33 1.5
BC071167-1|AAH71167.1| 391|Homo sapiens casein kinase 2, alpha ... 33 1.5
BC053532-1|AAH53532.1| 391|Homo sapiens casein kinase 2, alpha ... 33 1.5
BC050036-1|AAH50036.1| 397|Homo sapiens CSNK2A1 protein protein. 33 1.5
BC011668-1|AAH11668.1| 391|Homo sapiens casein kinase 2, alpha ... 33 1.5
AL049761-3|CAB65624.1| 391|Homo sapiens casein kinase 2, alpha ... 33 1.5
AL049761-2|CAM28336.1| 255|Homo sapiens casein kinase 2, alpha ... 33 1.5
BC130432-1|AAI30433.1| 612|Homo sapiens otopetrin 1 protein. 32 2.6
BC130430-1|AAI30431.1| 612|Homo sapiens otopetrin 1 protein. 32 2.6
X70251-1|CAA49758.1| 391|Homo sapiens casein kinase II alpha su... 31 4.5
AY112721-1|AAM52224.1| 391|Homo sapiens casein kinase II alpha ... 31 4.5
AF162278-1|AAF00199.1| 436|Homo sapiens Skn-1a/Epoc-1/Oct-11 PO... 31 4.5
>AK075118-1|BAC11413.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ90637 fis, clone PLACE1003772, weakly similar to
EXTENSIN PRECURSOR. ).
Length = 246
Score = 37.5 bits (83), Expect = 0.052
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 2/127 (1%)
Frame = +2
Query: 269 GDMTDGSPKKNGMARQRVVRDTPTRPRDTHSRLFGQAASNGPVSPLITDTIRSNIQFGDS 448
G+ + P + A QR P R H + GQ P SP + + G +
Sbjct: 71 GNAPETQPTRRRGAGQRHCNQKPKAGR--HFQTLGQPLVGTPPSPQDAAPRQGSPGPGPA 128
Query: 449 EMNG-GSPTHSPAKMMNGSAYSTPSRASYTPPKRNPVTGDGVPLTPLRRRH-PAASLREG 622
P S A +G TPS + P P GD P +PL H P L
Sbjct: 129 RTTAVWRPAPSGAAAEHGQKPQTPSASLQPPFPPPPPPGDPTPPSPLPPAHVPPTLLTLQ 188
Query: 623 NPITGDG 643
P+TG+G
Sbjct: 189 EPVTGEG 195
>AB046767-1|BAB13373.1| 863|Homo sapiens KIAA1547 protein protein.
Length = 863
Score = 34.7 bits (76), Expect = 0.36
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 455 NGGSPTHSPAKMMNGSAYSTPSRASYTPPKRNPVTGDGVPLTPLRRRHPAASLREGNPIT 634
+ +P+ + + STP S TP RN G TP R PA++LR IT
Sbjct: 396 SSSTPSSKTKDLGHNDKSSTPGLKSNTPTPRNDAPTPGTSTTPGLRSMPASALRTPISIT 455
Query: 635 GDGYKSMNGANEHNDVN 685
Y + H+++N
Sbjct: 456 -SSYAAPFAMMSHHEMN 471
>S53149-1|ABB72474.1| 391|Homo sapiens casein kinase II-alpha
subunit protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>M55265-1|AAA35503.1| 391|Homo sapiens casein kinase II alpha
subunit protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>J02853-1|AAA56821.1| 391|Homo sapiens casein kinase II alpha
subunit protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>BT019792-1|AAV38595.1| 391|Homo sapiens casein kinase 2, alpha 1
polypeptide protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>BC071167-1|AAH71167.1| 391|Homo sapiens casein kinase 2, alpha 1
polypeptide protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>BC053532-1|AAH53532.1| 391|Homo sapiens casein kinase 2, alpha 1
polypeptide protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>BC050036-1|AAH50036.1| 397|Homo sapiens CSNK2A1 protein protein.
Length = 397
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>BC011668-1|AAH11668.1| 391|Homo sapiens casein kinase 2, alpha 1
polypeptide protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>AL049761-3|CAB65624.1| 391|Homo sapiens casein kinase 2, alpha 1
polypeptide protein.
Length = 391
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>AL049761-2|CAM28336.1| 255|Homo sapiens casein kinase 2, alpha 1
polypeptide protein.
Length = 255
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A MM+G + S P+ +
Sbjct: 172 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANMMSGIS-SVPTPSP 227
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 228 LGPLAGSPVIAAANPL 243
>BC130432-1|AAI30433.1| 612|Homo sapiens otopetrin 1 protein.
Length = 612
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 426 LRMVSVINGETGPLLAACPKS 364
LR+V+V NG T PL ++CPKS
Sbjct: 461 LRVVTVCNGNTMPLASSCPKS 481
>BC130430-1|AAI30431.1| 612|Homo sapiens otopetrin 1 protein.
Length = 612
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 426 LRMVSVINGETGPLLAACPKS 364
LR+V+V NG T PL ++CPKS
Sbjct: 461 LRVVTVCNGNTMPLASSCPKS 481
>X70251-1|CAA49758.1| 391|Homo sapiens casein kinase II alpha
subunit protein.
Length = 391
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A +M+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANVMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>AY112721-1|AAM52224.1| 391|Homo sapiens casein kinase II alpha
subunit protein.
Length = 391
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 350 DTHSRLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYSTPSRAS 529
D SRL + A P ++ + G S M GGS S A +M+G + S P+ +
Sbjct: 308 DHQSRLTAREAME---HPYFYTVVKDQARMGSSSMPGGSTPVSSANVMSGIS-SVPTPSP 363
Query: 530 YTPPKRNPVTGDGVPL 577
P +PV PL
Sbjct: 364 LGPLAGSPVIAAANPL 379
>AF162278-1|AAF00199.1| 436|Homo sapiens Skn-1a/Epoc-1/Oct-11 POU
transcription factor protein.
Length = 436
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 332 TPTRPRDTHSRLFGQAASNGPVS-PLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSA 505
TP +P D +SRL + S GP+S P + T+ + S N P+ SP ++ S+
Sbjct: 345 TPIKPPDYNSRLVSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPS-SPGSGLHASS 402
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,855,716
Number of Sequences: 237096
Number of extensions: 2701852
Number of successful extensions: 13380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13375
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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