Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7n22
(562 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.62
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 28 0.82
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 27 2.5
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 27 2.5
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 26 3.3
SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 3.3
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 26 3.3
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy... 26 4.4
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 4.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.6
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 7.6
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 25 7.6
SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.6
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 28.7 bits (61), Expect = 0.62
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = -2
Query: 510 SPSSSLVRTSASVRFSSTP-----*AHL*PSGSSAVSLLAPTHIESISNWDSDNASA-KN 349
+PSSS +S+S SSTP + + S SS+VS + + SIS+ D+ SA N
Sbjct: 148 TPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSADAKTVSASSN 207
Query: 348 SAISFLS 328
S IS S
Sbjct: 208 STISGFS 214
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 28.3 bits (60), Expect = 0.82
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 137 IFFNFSLLCAASYHEQYRVPQTISNNWESYVFNG 238
I + F LL A YH+Q + Q I NNW F+G
Sbjct: 1603 IQYYFHLL-ARCYHKQGQWQQEIENNWSEGSFDG 1635
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 435 SGSSAVSLLAPTHIESISNWDSDNASAKNSAISFLSKIAKDP 310
+G AV L A H+ ++ N +S N + + AIS L DP
Sbjct: 900 TGQQAVRLTATKHLAALINSESANDNLNHWAISLLIFQLYDP 941
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 411 LAPTHIESISNWDSDNASAKNSAISFLSKIAKDPLW*PLHKISAFSHL 268
L PTH + ++ D S+KN + F S+I+ P+ P+ +++ +
Sbjct: 121 LQPTHTVNSNSDDGYENSSKNEYLDFNSEISASPVNEPMTHSQSYTSI 168
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 26.2 bits (55), Expect = 3.3
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 516 RLSPSSSLVRTSASVRFSSTP*AHL*PSGSSAVSLLAPTHIESISNWD 373
RL P ++L+ T V FS H S AVS+LA E I NWD
Sbjct: 333 RLQPLNNLIET-LPVEFSEAS-MHF-ELDSVAVSILAFVLSEPIKNWD 377
>SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 3.3
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 155 LLCAASYHEQYRVPQTISNNWESYVFNG 238
++C YH + ++SN + Y+F+G
Sbjct: 71 VVCIMDYHNDLFLTYSLSNAYREYIFDG 98
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 218 ESYVFNGKEYILHNLGVKWENAEILCRGYHNGSLAILDKKEIAEFLAEALSESQFDIDSI 397
E YV + E + HN+ E+ Y LA ++ E + +++S+S+ +DS
Sbjct: 486 EDYVDSEWEVVPHNIASYTTIKELGIGAYGQVKLATYKSNKVHEVILKSISKSRILLDS- 544
Query: 398 WV 403
W+
Sbjct: 545 WM 546
>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 192 CHRQYQIIGNH-TSSMARSIFYIIWELNGRTLKFYAEATTMDL 317
CH QY ++G T SM I + W + + A TTMD+
Sbjct: 215 CH-QYLVLGGRITDSMVLVIIFHTWYVLDSLINESAVLTTMDI 256
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.8 bits (54), Expect = 4.4
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -2
Query: 510 SPSSSLVRTSASVRFSSTP*AHL*PSGSSAVSLLAPTHIESISNWDSDNASAKNSA 343
S SSSLV ++ S S+TP S SS+ S + + S S+ S +S++ ++
Sbjct: 123 SSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTS 178
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 4.4
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 504 SSSLVRTSASVRFSSTP*AHL*PSGSSAVSLLAPTHIESISN 379
SS+LV +S+S+ SS+P A S + S L T+ S+SN
Sbjct: 674 SSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSN 715
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 7.6
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -2
Query: 510 SPSSSLVRTSASVRFSSTP*AHL*PSGSSAVSLLAPTHIESISNWDSDNASAKNSAIS 337
S SSS++ +S+S SS+P + SS+ S +PT S + S ++S+ +S +S
Sbjct: 267 SSSSSIISSSSSS--SSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLS 322
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 7.6
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -2
Query: 543 VLFTQIG*CRLSPSSSLVRTSASVRFSSTP*AHL*PSGSSAVSLLAPTHIESISNWDSDN 364
V T G + + SSS V ++ S SS+ PS SS + +P+ S S+ S +
Sbjct: 115 VYLTGNGVLQTTVSSSSVSSTTSSSSSSS------PSSSSTTTTTSPSSSSSSSSSSSSS 168
Query: 363 ASAKNSAIS 337
+S+ +S+ S
Sbjct: 169 SSSSSSSSS 177
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 HRQYQIIGNHTSSMARSIFYIIW-ELNGRTLKFYAEATTM 311
+R++ + NH++ +FY+ W EL+G + + T+
Sbjct: 256 YREHHNLINHSTPEKLRLFYLFWQELDGLGIVLFVSGFTL 295
>SPCC622.14 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 7.6
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 384 SNWDSDNASAKNSAISFLSKIAKDPLW*PLHKISAFS 274
SN + N+SA+N+ SFL +++ +P+ H + FS
Sbjct: 183 SNSVNPNSSARNNGGSFLDQLSSNPVSALSHGWNMFS 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,453,467
Number of Sequences: 5004
Number of extensions: 52551
Number of successful extensions: 156
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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