Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7n06
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0116 - 907995-908813,909002-909286 38 0.008
04_03_0967 + 21318974-21319140,21321677-21321821,21322045-213221... 36 0.031
06_01_0848 - 6463100-6463293,6463983-6465144 33 0.16
09_04_0669 + 19335661-19335917,19336153-19336279,19336393-193367... 31 0.87
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 31 0.87
03_01_0391 - 3030532-3031344,3033177-3033434 31 0.87
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 31 1.1
01_05_0586 + 23443371-23444645 31 1.1
01_05_0315 + 20803035-20803154,20803235-20804089,20804171-208043... 31 1.1
03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867,948... 30 2.0
05_07_0213 + 28443724-28443775,28443901-28444007,28444757-284456... 29 2.6
09_02_0450 + 9468495-9468528,9468947-9469062,9470031-9470858,947... 29 3.5
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332... 29 4.6
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 29 4.6
09_04_0696 - 19559227-19559622,19559710-19559862,19559957-195607... 28 6.1
05_03_0486 + 14616354-14617200,14617288-14617329,14619433-14620508 28 6.1
04_04_0078 + 22573413-22573554,22573637-22573959,22574681-225753... 28 6.1
03_05_0509 - 25032494-25033156 28 6.1
01_06_0278 - 28111655-28112531,28113896-28114029,28114131-281149... 28 6.1
01_06_0060 + 26068792-26069363,26069525-26070209 28 6.1
09_05_0013 + 20067115-20067183,20067585-20067691,20067905-200680... 28 8.1
06_03_0046 - 15852653-15854560 28 8.1
05_01_0257 + 1967471-1967695,1968571-1969395 28 8.1
01_06_1280 - 35959452-35960105 28 8.1
>06_01_0116 - 907995-908813,909002-909286
Length = 367
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +1
Query: 337 LFGVFPVIALPKSVISCGIYGIPLVLSVVGLQLYTAALLGRCWLLAKEITPIISEK 504
L V P +ALP V G+ LV +VV + YT L+G C KE P I+EK
Sbjct: 286 LMMVLPALALPSRVAGAAFLGMFLVGTVVAMGSYT-VLIGSCTEALKERVPRITEK 340
>04_03_0967 +
21318974-21319140,21321677-21321821,21322045-21322164,
21322261-21322395,21322503-21322564,21322804-21322879,
21323555-21323656,21323732-21323848,21324403-21324461,
21324927-21325101,21325233-21325367,21325429-21325545,
21325686-21325794,21325939-21326051,21326561-21326615,
21326657-21326769
Length = 599
Score = 35.9 bits (79), Expect = 0.031
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 469 LAKEITPIISEKNRSPYAAVAQLAFGDPARRLVIFLIDA-TVFGSGVPNFILAAQSLQIF 645
LA + + E N+S AA A A P + + L+D V SG+PNF A +L
Sbjct: 270 LADSLCGVFGETNQSELAAFASYALAFPT--IFLALVDTYDVMRSGIPNFCAVALALHDL 327
Query: 646 WWKISG 663
+K SG
Sbjct: 328 GYKASG 333
>06_01_0848 - 6463100-6463293,6463983-6465144
Length = 451
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +3
Query: 372 KRDKLRNIRHPPSPVSGWPAAIHRCPAGEVLAIGQRNHSYYQRKEQESIRSCGTTSVRRS 551
+R L + HPP P P +HR + A + E + SCG T R+
Sbjct: 5 RRSFLSRLLHPPCPTPANPLPLHRLLSSAAAAAPIPPEPF--AVEDYLVDSCGLTRA-RA 61
Query: 552 GQEAGDLSDRR-----HRLRLWRSKLHLSRPEPADILVED 656
+ +G LS R + + S L LSRP+ A ++V D
Sbjct: 62 KKASGKLSHLRSPSNPDAVLAFLSGLGLSRPDIAAVVVND 101
>09_04_0669 +
19335661-19335917,19336153-19336279,19336393-19336771,
19336857-19336915,19337413-19337449,19337629-19337996,
19338493-19338543
Length = 425
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 279 CWRNHRWAQRSVYYPLHSRSLRSVSCHSTT*KRDKLRNIRHPPS 410
C RNH +R Y+P H +L + + D R +RHP S
Sbjct: 19 CRRNHDQGRRHRYFPAHRAALAAALSRFRSKLLDLRRALRHPSS 62
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 307 VLFTILCIVDLFGVF---PVIALPKSVISCGIYGIPLVLSVVGLQLYTAALLGR--CW 465
+++++LC V L +F PV P G + LV S+ LQL AA+LG CW
Sbjct: 52 IIYSLLCEVTLKCLFLTSPVCCPPFMAGDYGNENVQLVKSISDLQLPKAAILGNHDCW 109
>03_01_0391 - 3030532-3031344,3033177-3033434
Length = 356
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 337 LFGVFPVIALPKSVISCGIYGIPLVLSVVGLQLYTAALLGRCWLLAKEITPIISEK 504
L V P +ALP G+ L+ +V + YT A +G C KE P I+EK
Sbjct: 275 LLMVLPSLALPSRFAGAAFLGMFLMGTVFSMGSYT-AFVGSCSEALKEKVPRITEK 329
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 270 PLHCWRNHRWAQRSVYYPLHSRSLRSVSCHSTT*KRDKLRNIRHPPSPVSGWPAA 434
P H W +HR + +H +R+ H +T +LR++ H + V+ PAA
Sbjct: 376 PEHEWDHHRALISDYIFEVHMYEVRTAYRHPSTVGMFQLRSVMHRDALVNSPPAA 430
>01_05_0586 + 23443371-23444645
Length = 424
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/113 (23%), Positives = 48/113 (42%)
Frame = +1
Query: 298 GLSVLFTILCIVDLFGVFPVIALPKSVISCGIYGIPLVLSVVGLQLYTAALLGRCWLLAK 477
G S T L + + V+++P +V G + L + V + YT L+ RC
Sbjct: 36 GASFSRTCLNLTNAVSGIGVLSMPYAVSQGGWLSLLLFVLVGAVCYYTGTLIERC----- 90
Query: 478 EITPIISEKNRSPYAAVAQLAFGDPARRLVIFLIDATVFGSGVPNFILAAQSL 636
+ ++ + + Y + Q AFG RR V F + ++ + +L +L
Sbjct: 91 ----MRADGSIASYPDIGQYAFGATGRRAVAFFMYVELYLVAISFLVLEGDNL 139
>01_05_0315 +
20803035-20803154,20803235-20804089,20804171-20804350,
20805191-20805286,20805895-20806179
Length = 511
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 345 SEEIYYAEDSKQNAEPTGGFANSVAVVTRHHQGLGL 238
+EE++ D + A T GF +++ + R H GLG+
Sbjct: 79 TEELFGTSDRQLRALSTNGFIDTINFILRKHSGLGV 114
>03_02_0565 -
9484045-9484335,9484621-9484686,9484790-9484867,
9485005-9485157,9485271-9485356,9485445-9485551,
9485685-9485752,9485890-9485912,9487627-9487732,
9487772-9487899,9487989-9488065,9488126-9488131,
9488206-9488264
Length = 415
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 472 PIASTSPAGQ-RCIAAGQPLTGLGGCRIFRNL 380
PIA+TS A R AAG+P+TG GG R + L
Sbjct: 213 PIAATSAAHLVRWTAAGEPMTGDGGFRSSKRL 244
>05_07_0213 +
28443724-28443775,28443901-28444007,28444757-28445644,
28445760-28445762,28446006-28446398
Length = 480
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 354 RKHSEEIYYAEDSKQNAEPTGG-FANSVAVVTRHHQGLGLRLLEWSFRGAISIHPRQF 184
R H I + NA GG F+ V + R+H G+G+++ + G + ++
Sbjct: 83 RSHPNLILNKDTIGLNASACGGNFSRKVDHIMRNHSGIGVKIFRLEYLGVVGFDASRY 140
>09_02_0450 +
9468495-9468528,9468947-9469062,9470031-9470858,
9470955-9471107,9471194-9471604
Length = 513
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/59 (22%), Positives = 27/59 (45%)
Frame = -1
Query: 360 YDRKHSEEIYYAEDSKQNAEPTGGFANSVAVVTRHHQGLGLRLLEWSFRGAISIHPRQF 184
Y ++ ++ ++ ++ E T F + V + H G+G++ L F G S R +
Sbjct: 77 YSWRNRPKLSFSTETMGIVEGTTDFIRKIDRVMKKHSGIGVKALTIEFNGLFSTKARSY 135
>01_07_0305 -
42631214-42631330,42631423-42631527,42633208-42633216,
42635198-42636142,42636349-42636450,42637210-42637302
Length = 456
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 282 WRNHRWAQRSVYYPLHSRSLRSVSCHSTT*KRDKLRNIRHPPSPVSGW 425
WR W QR P H LR R + R+ R PP P+S +
Sbjct: 305 WRRRGWRQRGRRSPAHPPWLRMGRGGGARCSRRRGRSRRPPPLPLSSF 352
>01_06_1818 -
40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 178 LSELPRMNGNCTPETPLEESQTKPLVVSSHDRYTVGE-TTGGLSVLFTILCIVDLFGVFP 354
++ L + G C P L E L++ + D + E + G SVL T+L ++D + ++
Sbjct: 432 ITTLVKAFGECRP---LRELANLILIMGNRD--DIDEMSAGNASVLTTVLKLIDKYDLYG 486
Query: 355 VIALPK 372
+A PK
Sbjct: 487 SVAFPK 492
>09_04_0696 -
19559227-19559622,19559710-19559862,19559957-19560784,
19561727-19561842,19562286-19562319
Length = 508
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = -1
Query: 360 YDRKHSEEIYYAEDSKQNAEPTGGFANSVAVVTRHHQGLGLRLLEWSFRGAISIHPRQF 184
Y ++ ++ ++ ++ E T F + V H G+G++ L F G S R +
Sbjct: 77 YSWRNRPKLSFSTETMGIVEGTTDFIRKIDRVMEKHSGIGVKALTIEFNGLFSTKARSY 135
>05_03_0486 + 14616354-14617200,14617288-14617329,14619433-14620508
Length = 654
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 475 WPIASTSPAGQRCIAAGQPLTGLGGC 398
+PI S SPA QR + + P G C
Sbjct: 83 YPITSISPASQRLVVSPAPFVSPGAC 108
>04_04_0078 +
22573413-22573554,22573637-22573959,22574681-22575313,
22575383-22575838
Length = 517
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 337 LFGVFPVIALPKSVISCGIYGIPLVLSVVGLQLYTAALLGRCWLLAKEITPIISEKNRSP 516
+ G ++ L S + YG VL +VG + A +G W++ ++ SE P
Sbjct: 330 ILGAVNLVCLMLSTLVIDRYGRK-VLFMVGGAIMIIAQVGVAWIMGAQVGKNGSEAMARP 388
Query: 517 YAAVAQLAF 543
Y AVA +AF
Sbjct: 389 Y-AVAVVAF 396
>03_05_0509 - 25032494-25033156
Length = 220
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 471 GQRNHSYYQRKEQESIRSCGTTSVRRSGQEAGDLSDRRHRLRLWRSKLHLSRPEP 635
G +H ++ R+ + S SC TSV + AGD H LR RS+ R +P
Sbjct: 15 GHHHHHHHHRRHR-SETSCPPTSVAVAAARAGDAHAPDHPLR--RSQAFPPRRQP 66
>01_06_0278 -
28111655-28112531,28113896-28114029,28114131-28114992,
28115636-28115735,28115848-28115939,28116031-28116122
Length = 718
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 358 IALPKSVISCGIYGIPLVLSVVGLQLYTAALLG 456
+ P IS G+Y IP L + L + AAL G
Sbjct: 452 LTAPSKFISVGVYMIPFALLLAPLPIVAAALAG 484
>01_06_0060 + 26068792-26069363,26069525-26070209
Length = 418
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 397 GIPLVLSVVGLQLYT-AALLGRCWLLAKEITPIISEKNRSPYAAVAQL 537
G P V V G+ LY +++G W LA + + E R PYA + L
Sbjct: 295 GRPRVKVVAGVDLYGFGSVVGGDWQLASTVPGELVEGFRKPYAVMTGL 342
>09_05_0013 +
20067115-20067183,20067585-20067691,20067905-20068037,
20068163-20068306,20068415-20068573,20068710-20068783,
20068907-20068982,20069100-20069155,20069346-20069433,
20069508-20069648,20069737-20069886,20070165-20070398
Length = 476
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 372 FR*CYDRKHSEEIYYAEDSKQNAEPTGGFAN 280
+R Y+RK EEI A+ N T G+AN
Sbjct: 444 YRRFYERKADEEIAAAKAKYSNGHATNGYAN 474
>06_03_0046 - 15852653-15854560
Length = 635
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 270 PLHCWRNHRWAQRSVYYPLHSRSLRSVSCHSTT*KRDKLRNIRHPPSPVSGWPAA 434
P H W +HR + +H +R+ H + +LR++ H + V+ PAA
Sbjct: 375 PEHEWDHHRALISDHLFEVHMYEVRTAYRHPSAVGMFQLRSVMHRDALVNSPPAA 429
>05_01_0257 + 1967471-1967695,1968571-1969395
Length = 349
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +3
Query: 456 EVLAIGQRNHSYYQRKEQESIRSCGTTSVRRSGQEAGDLSDRRHRLRLW 602
+ A+G ++SYY Q + +R G A DL++ R W
Sbjct: 266 DTAAVGALDNSYYHNNLQNRVLFKSDWVLRTDGDAAADLAEYRDNATKW 314
>01_06_1280 - 35959452-35960105
Length = 217
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -3
Query: 277 CSGRD*TPPRAWSATPRV-EFPGC--NFHSSSAVQTRSRGKKKENEKLIN*QITDTHSRT 107
C GR TPPR A PRV E P C F A+ R + E E T T +
Sbjct: 104 CLGRQPTPPRPQPAKPRVHECPVCGLEFPIGQALGGHMRRHRAEAEAAATTTTTTTKNGD 163
Query: 106 IFFAN*IKS 80
+ A +K+
Sbjct: 164 VGKAAAVKA 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,228,971
Number of Sequences: 37544
Number of extensions: 483289
Number of successful extensions: 1440
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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