Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m23
         (368 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0734 + 5726326-5727517,5727587-5727771,5727776-5728756           27   3.5  
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888...    27   6.1  

>01_01_0734 + 5726326-5727517,5727587-5727771,5727776-5728756
          Length = 785

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +1

Query: 25 SFLL*FFLTQAGLTAQS 75
          SFLL FFLT AGLT Q+
Sbjct: 7  SFLLIFFLTTAGLTLQT 23


>12_02_0768 -
           22988119-22988223,22988337-22988558,22988645-22988810,
           22989176-22989181,22989281-22989453,22989737-22989928,
           22990034-22990211,22990302-22990444,22990666-22990755,
           22990869-22990991,22991391-22991568,22992213-22992442,
           22992557-22992616,22992731-22992798,22992908-22992953
          Length = 659

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 40  FFLTQAGLTAQSPLSTLLL*HYRNKYEE 123
           F   +AGL A + L ++ + H++ KYEE
Sbjct: 286 FRAMRAGLVADTYLESMSITHFKKKYEE 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,187,520
Number of Sequences: 37544
Number of extensions: 136260
Number of successful extensions: 233
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)