Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m19
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical pr...    94   9e-20
Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical pr...    94   9e-20
Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical pr...    90   1e-18
Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical p...    31   0.52 
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 51/133 (38%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
 Frame = +3

Query: 267 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 440
           LS EQ+ FY +NGYL+I+  +    L  ++QRF  IC+  V +P  + ++K+ ++ +   
Sbjct: 16  LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75

Query: 441 KP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD---DITAIHSMFINKPPG---- 596
           K  E+ I K+Q+   D V   Y ++P ++DV+   IG+   ++ A+H+M INKPP     
Sbjct: 76  KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135

Query: 597 TARHPPHQDLFYF 635
           T+RHP HQDL YF
Sbjct: 136 TSRHPMHQDLQYF 148


>Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 51/133 (38%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
 Frame = +3

Query: 267 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 440
           LS EQ+ FY +NGYL+I+  +    L  ++QRF  IC+  V +P  + ++K+ ++ +   
Sbjct: 16  LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75

Query: 441 KP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD---DITAIHSMFINKPPG---- 596
           K  E+ I K+Q+   D V   Y ++P ++DV+   IG+   ++ A+H+M INKPP     
Sbjct: 76  KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135

Query: 597 TARHPPHQDLFYF 635
           T+RHP HQDL YF
Sbjct: 136 TSRHPMHQDLQYF 148


>Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical
           protein ZK550.5 protein.
          Length = 328

 Score = 90.2 bits (214), Expect = 1e-18
 Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
 Frame = +3

Query: 267 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEKNLK 443
           LS EQK FY +NG+L+++  +    L  Y+ +F  IC + +   P M+V +     K + 
Sbjct: 32  LSVEQKQFYQKNGFLLVRGCVAKDELKKYENQFNAICERKVKPPPNMLVMKDVSIAKKVT 91

Query: 444 PE--EYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDD---ITAIHSMFINKPPG---- 596
           P+  + I K+Q+   + V  +Y E+ ++ DV+   IG     ITA+H+M INKPP     
Sbjct: 92  PDSIDTITKVQDFTDEPVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGAL 151

Query: 597 TARHPPHQDLFYF 635
           T+RHP HQDL YF
Sbjct: 152 TSRHPMHQDLIYF 164


>Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical
           protein Y57G11C.32 protein.
          Length = 795

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 198 KMPLKGLKVLPNPVFSELPQNYRLSEEQKSFYWENGYLVI 317
           ++PL+  +VLPNP++ E P +   +EE K+F    GY+ I
Sbjct: 201 ELPLESDEVLPNPIYEE-PGDQSETEEVKAFREIFGYIQI 239


>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
           protein T05A7.11 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 450 EYINKLQEILYDDVFMTYGEHPRLLDVISQF 542
           EY+ KL +IL++D   T+G +P    ++ Q+
Sbjct: 594 EYLTKLYDILFNDETFTFGSNPSSPFLVIQY 624


>Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical
           protein ZK849.4 protein.
          Length = 602

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 306 YLVIKELIDFTSLYS-YKQRFLQICKGIVDSPVMIVKEQALFEKNLKPEEY 455
           YLV+ +++ F  + +  K+RF+ + K +VDS  +  +E  +  K +K + Y
Sbjct: 217 YLVLSQILLFREISTKVKKRFVDL-KCLVDSKFLTDEELKILSKEVKCDHY 266


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 69   CECTNYAYYVGTYIEQKISEFCVNNS 146
            C+CT+  Y  G Y E+  SE CV++S
Sbjct: 1836 CQCTDQFY--GIYCEKSCSEQCVHSS 1859


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,306,967
Number of Sequences: 27780
Number of extensions: 291886
Number of successful extensions: 656
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)