Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m13
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060718-1|AAL28266.1|  561|Drosophila melanogaster GH16191p pro...    28   7.2  
AE014297-3361|AAF56165.2|  561|Drosophila melanogaster CG31148-P...    28   7.2  
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    28   9.5  

>AY060718-1|AAL28266.1|  561|Drosophila melanogaster GH16191p
           protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
 Frame = +1

Query: 352 RLADAEY-KVCLCKADWCN 405
           +L DAE+ KVC+C AD+C+
Sbjct: 31  KLIDAEHGKVCVCTADYCD 49


>AE014297-3361|AAF56165.2|  561|Drosophila melanogaster CG31148-PA
           protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
 Frame = +1

Query: 352 RLADAEY-KVCLCKADWCN 405
           +L DAE+ KVC+C AD+C+
Sbjct: 31  KLIDAEHGKVCVCTADYCD 49


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
            protein.
          Length = 1998

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = -1

Query: 382  DKLYTQHQQAFRVYMS*LLWVKTLNAVRRRFYWVDNSLVEPTTNYVPLPSMILRSTWHFL 203
            +++  QHQQ  R+Y S       +++          S++ PTT++  LP   L S+   L
Sbjct: 1572 EQIQLQHQQQHRIYASFGTSSSAMSSAHAANSSTKPSILTPTTSFNALPHFPLSSSTSSL 1631

Query: 202  NTK 194
             +K
Sbjct: 1632 LSK 1634


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,836,618
Number of Sequences: 53049
Number of extensions: 437719
Number of successful extensions: 1237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)