Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m12
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL024454-1|CAA19658.1|  263|Drosophila melanogaster EG:121E7.2 p...    29   6.9  
AE014298-543|AAG22404.2|  384|Drosophila melanogaster CG2872-PC,...    29   6.9  

>AL024454-1|CAA19658.1|  263|Drosophila melanogaster EG:121E7.2
           protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -3

Query: 496 SLGNNRRTSAYLL-WTLAGSRTD*APXXXXXXXXXXXSNHAPSALC-LFQIFFKMTLLIA 323
           SL   R  + YL  W L  S                   +A SA C LFQ+ F ++  +A
Sbjct: 80  SLRTERNATLYLSPWLLTNSSDKNQSVPDLAQTQQKIFIYAFSAFCILFQVSFFLSSYVA 139

Query: 322 TFALLCFL 299
              L+CFL
Sbjct: 140 PLTLICFL 147


>AE014298-543|AAG22404.2|  384|Drosophila melanogaster CG2872-PC,
           isoform C protein.
          Length = 384

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -3

Query: 496 SLGNNRRTSAYLL-WTLAGSRTD*APXXXXXXXXXXXSNHAPSALC-LFQIFFKMTLLIA 323
           SL   R  + YL  W L  S                   +A SA C LFQ+ F ++  +A
Sbjct: 184 SLRTERNATLYLSPWLLTNSSDKNQSVPDLAQTQQKIFIYAFSAFCILFQVSFFLSSYVA 243

Query: 322 TFALLCFL 299
              L+CFL
Sbjct: 244 PLTLICFL 251


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,355,006
Number of Sequences: 53049
Number of extensions: 478133
Number of successful extensions: 1084
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)