Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m11
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical ...    32   0.39 
AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine re...    28   4.8  
AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine re...    28   4.8  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U64608-5|AAB04596.1|  393|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U00031-7|AAK18870.2|  422|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical
           protein R06B10.2 protein.
          Length = 1014

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 24/99 (24%), Positives = 37/99 (37%)
 Frame = +3

Query: 144 KENLSSHDEARDNVVALMQNVLCKNFPTIPCDIITKDETLKHLXXXXXXXXXXXXRSMDK 323
           +  L S  E  +  + +  +V  K    +P  II KD+  K               S  K
Sbjct: 61  QRKLDSSSEQLEEQLMMFASVYEKTKGVVPGSIIPKDDVYK-TQLDALKIKWSKVDSFAK 119

Query: 324 TIGTDINNLSQLPVINTDDDANMPTEDGDRPKHHTSDWT 440
            I   +N +  +  + +DDDAN+   D         DWT
Sbjct: 120 GIVIFLNEMESMEGVTSDDDANIKLSDMAPHLPKFKDWT 158


>AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform a protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 587 QFLFRMSVFVSSIERVLLFDFVWIKFTYFFTS 492
           Q+ F   +F   + R  L DF+W  + +FF +
Sbjct: 111 QYFFPFHIFTRFLSRRNLPDFIWYLYAFFFVN 142


>AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform b protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 587 QFLFRMSVFVSSIERVLLFDFVWIKFTYFFTS 492
           Q+ F   +F   + R  L DF+W  + +FF +
Sbjct: 132 QYFFPFHIFTRFLSRRNLPDFIWYLYAFFFVN 163


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 305 FVLNLLYRLLYQM-F*CFVLSNDVTRNRREVLAQDILHERDHVVARFVV 162
           F LN++Y L+Y M +  + +++ ++ NR  ++    L ER  +   F++
Sbjct: 81  FTLNIMYSLMYNMSYVQYAITSIISINRLSIIWNHFLFERLWIKYSFIL 129


>U64608-5|AAB04596.1|  393|Caenorhabditis elegans Hypothetical
           protein T22B7.7 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -2

Query: 391 MFASSSVLITGSCDKLFISVPIVLSIDLFLYLICCIDFCIKCFNVSSLVMMSHGIVGKF 215
           MF+ +SV ++   D  F+ V  + SI  F   +C +D   + F V+S V + +    KF
Sbjct: 293 MFSKTSVRVSSIDDAEFMKVVEIGSILKFSAFVCNVDNKEQKFQVNSQVEVYNSNTNKF 351


>U00031-7|AAK18870.2|  422|Caenorhabditis elegans Hypothetical
           protein B0361.7 protein.
          Length = 422

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 2/116 (1%)
 Frame = +3

Query: 96  LRNNGLIHKMVSQFQDKENLSSHDEARDNVVALMQNVLCKNFPTIPC--DIITKDETLKH 269
           LR   L+ ++  +F DK + S   EA+    +   + +     T+    DI  K  T   
Sbjct: 245 LRGGTLLEEIFHRFSDKASGSLGKEAKFYAYSAHDSTIAALLATLGVFYDIYPKYATCLL 304

Query: 270 LXXXXXXXXXXXXRSMDKTIGTDINNLSQLPVINTDDDANMPTEDGDRPKHHTSDW 437
           +            R   K   TDI+ L +  +   DD   +     D  K+   DW
Sbjct: 305 IEMHKLANETRLIRVFHKN-ETDIDRLIEYSIPGCDDPCTLQKLGDDLKKYFPEDW 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,184,189
Number of Sequences: 27780
Number of extensions: 245664
Number of successful extensions: 745
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)