Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7m05
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 36 0.034
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 34 0.10
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 34 0.10
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 33 0.24
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 31 0.56
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 31 0.73
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 31 0.97
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 31 0.97
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 0.97
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 30 1.3
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 30 1.3
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 30 1.7
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.0
X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1 prot... 29 3.0
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 29 3.0
AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1 ... 29 3.0
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 29 3.0
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 5.2
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 5.2
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 5.2
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 28 5.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 6.8
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical... 27 9.1
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 41.5 bits (93), Expect = 5e-04
Identities = 31/97 (31%), Positives = 38/97 (39%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAG 425
P PT + P P P + PS+I PPP P P+ L P AN
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP----PPLPSEEKKNPL-PTANNGHTD 1414
Query: 426 PGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 536
G + T + N YSMPP + EGS R P
Sbjct: 1415 NGSDDIDRNVPTPPSQNQYSMPPPVMGGHEGSWRGGP 1451
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.5 bits (78), Expect = 0.034
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +3
Query: 234 VRQNPWTPTKRRGPIAAEASS--PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLA 407
VRQNP P ++ P + +A+ P PA P + PP + P PA QK P+
Sbjct: 377 VRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPA----QKAQPVT 432
Query: 408 -NIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGE---AKEGSKRAAPAFSITGRGKFS 569
A A P S + S P++ + KE S + P + R FS
Sbjct: 433 QQQASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPKEPSISSEPTTTKKPRKSFS 490
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +3
Query: 219 ETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPP-PESRKPRAPAFTFGQKL 395
+TP V+Q P P ++ P A + P PA P + PP P ++ +AP +
Sbjct: 302 QTPP-VQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVV----QQ 356
Query: 396 DPLANIAKAGPGPASYNTEGMTAKAP-NTYSMPPVLGEAKEGSKRAAP 536
P + +A P P + P P +A + + AP
Sbjct: 357 APAPPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAP 404
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 33.9 bits (74), Expect = 0.10
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP--LANIAK 419
P+ P+ + P++ +P A ++P+ K P E R P T G P NI
Sbjct: 195 PYEPSMK--PVSTYPMAPIFAE-TIPTSPAKDPSEGYVTR-PISTVGHPSPPPLFPNI-- 248
Query: 420 AGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPG 599
P + + A+ T +M PV+ + P F I F + G+ PG
Sbjct: 249 ----PVPQRSPPVVARVFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPG 304
Query: 600 TYTTDRAAAALTKRPPAFTMAP 665
T T + A+ P A+ AP
Sbjct: 305 TLPTTKVDASKWNDPSAYATAP 326
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.10
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
Frame = +3
Query: 246 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP--LANIAK 419
P+ P+ + P++ +P A ++P+ K P E R P T G P NI
Sbjct: 197 PYEPSMK--PVSTYPMAPIFAE-TIPTSPAKDPSEGYVTR-PISTVGHPSPPPLFPNI-- 250
Query: 420 AGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPG 599
P + + A+ T +M PV+ + P F I F + G+ PG
Sbjct: 251 ----PVPQRSPPVVARVFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPG 306
Query: 600 TYTTDRAAAALTKRPPAFTMAP 665
T T + A+ P A+ AP
Sbjct: 307 TLPTTKVDASKWNDPSAYATAP 328
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 32.7 bits (71), Expect = 0.24
Identities = 31/133 (23%), Positives = 46/133 (34%)
Frame = +3
Query: 135 TARSVTADFRKSGLTHASSLLVKQSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVV 314
+ RS +K T A+ + + P V+Q P P P A + PGPA V
Sbjct: 34 STRSTRTTTQKRSSTKAADQ--QPAAPAPAPASVQQQPEAPAP--APTAPDVQQPGPAPV 89
Query: 315 SLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 494
+P P + +P A P+ + P P + T P
Sbjct: 90 PVPEPAQLAPQSAPEPTPDA----PAAAPVQETPQVAPAPETPAPAPETPAPAPVQETPQ 145
Query: 495 VLGEAKEGSKRAA 533
V+ A E + AA
Sbjct: 146 VVAPAPEPTPEAA 158
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 204 QSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 374
QS + ++ + V + PT RR P+ SS PA S P+ P P +KP PA
Sbjct: 200 QSFNADSSI-VEEASTIPTNRRAPMLIAPSST-PAGPSKPTARKPPTPRFKKPSTPA 254
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 31.1 bits (67), Expect = 0.73
Identities = 26/117 (22%), Positives = 50/117 (42%)
Frame = +3
Query: 186 SSLLVKQSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPR 365
S + V ++ + +TP + P + T + A+ ++ P +++ + P ++KP
Sbjct: 52 SDVTVAETPAVKTPTKAPKAPKSKTTKEPK--AKVAAAHPPFINMVTAAATKKPVAKKPV 109
Query: 366 APAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 536
A G+K +AK + AK+P + P AK +K+AAP
Sbjct: 110 AKKAATGEKKAKKTTVAK------KTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAP 160
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.97
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Frame = +3
Query: 240 QNPWTPTKRRGPIAAEAS-SPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIA 416
++P P R+ E P V PS + KPPP + RA + Q+++
Sbjct: 449 KSPTPPPLRKLEQCTELPPKPRKMVSRSPSPVNKPPPSPKVSRATSPKKSQQVEDSTQTT 508
Query: 417 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 536
+ TE A P S PV E + +K P
Sbjct: 509 QLSAETRPTQTEKPIAPVPPPISSIPVRKEMETQTKTPPP 548
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 452
P+AA + P V++ P+ + PP P AP A + A P P
Sbjct: 50 PVAAPVLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAPVL--AA 107
Query: 453 GMTAKAPNTYSMPPVLGEAKEGSKRAAPAFS 545
AP + P++ AAPAF+
Sbjct: 108 PAPFLAPPVPPVAPIVSAFAPRPVLAAPAFA 138
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 377
P+ + P PAV + KPPPE +P+ P F
Sbjct: 158 PVEPSPAPPVPAVPAAVEQEWKPPPEFERPKHPGF 192
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +3
Query: 300 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
GPA V L +I PP P P FG P A I GP P
Sbjct: 73 GPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPPP 117
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 321 PSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
P + PPP P P FG PLA I GP P
Sbjct: 52 PIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPP 89
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 276 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN-IAKAGPGPASYNTE 452
+AA A +P P V + P+L P APAF P+A+ + A P A+ +
Sbjct: 75 LAAPAFAPAPVVAAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASIN 134
Query: 453 GM-TAKAP 473
G+ A AP
Sbjct: 135 GLPVAAAP 142
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 234 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE---SRKPRAPAFTFGQKLDPL 404
++Q+ R G + AE + P VS+P G PP + S + RA T Q+ +P
Sbjct: 206 LQQHQQQQQNRAGQLQAEQAFANPPTVSIPPQTGHPPQQTSASSQQRAQE-TMAQQTEPQ 264
Query: 405 ANIAKA 422
++I ++
Sbjct: 265 SHIRES 270
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Frame = +3
Query: 201 KQSISCETPMGVRQNPWTPTKRRGPIAA-----EASSPGPAVVSLPSLIGKPPPESRKPR 365
+ S S + R +P T P AA E +P PA S P+ + P P P+
Sbjct: 32 RSSRSTRSTKSSRSSPKTVPVTEQPAAAPPQQLEQPTPAPAPESAPAPVQCPEPTPEVPQ 91
Query: 366 APAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAP 473
P Q P+ I + P P T +TA+ P
Sbjct: 92 QPT----QVSAPVQEITQGAPAPIPEPTP-VTAEQP 122
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = +3
Query: 162 RKSGLTHASSLLVKQSISCETPMGVRQNPWTPTKRRGP--------IAAEASSPGPAVVS 317
R SGL A S + +S + R PW P R+GP + G A +
Sbjct: 31 RDSGLNRAGSGSGGRPVSSTSNESWRNVPWGPPGRQGPAVHQHHQMVQVHTRRLGGAAPT 90
Query: 318 LPSLIGKPPPESRKPRAP 371
+ PPP R+P +P
Sbjct: 91 MHHSRPPPPPLDRRPMSP 108
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Frame = +3
Query: 165 KSGLTHASSLLVKQSISCETPMGVRQNPWT--PTKRRGPIAAEASSPGPAVVSLPSLIGK 338
++G +A++ VK + + TP +N PT P + P P + P K
Sbjct: 138 QTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTK 197
Query: 339 PPPESRKPRAPAFTFGQKLDPLANIAK----AGPGPASYNTEGMTAKAPNT 479
PP P T +++ +A + K P P E TAK T
Sbjct: 198 APPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETT 248
>Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical
protein M163.3 protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 297 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPN 476
P A + K P ++KP A G+K AK A+ + + AK+P
Sbjct: 112 PEKAAAAKKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKA-ATGDKKVKKAKSPK 170
Query: 477 TYSMPPVLGEAKEGSKRAAP 536
+ P AK +K+AAP
Sbjct: 171 KVAKPAAKKVAKSPAKKAAP 190
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP-AFTFGQKLDPLANIAKAGPG 431
P + P A +S P +P+ PP +AP A QK + +A P
Sbjct: 351 PPRATAPPKAAPASKAPTRAPIPARSAPAPPRGAPAKAPKAEPIAQK-KVAGKVQRAAPS 409
Query: 432 PASYNTEGMTAKAPNTYSMPPVLGEAKEGSKR 527
+ A AP + S P A E S+R
Sbjct: 410 KPASAVSAPKATAPASTSSAP--ATAPEASRR 439
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 231 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKP-PPESRKPRAPAFTFGQKLDPLA 407
G NP P K + EA +P P P G P PP P PA G+ P A
Sbjct: 127 GAPGNPGAPGKGAA-VPCEAKTPPPCK---PCPAGPPGPPGPDGPAGPAGPDGEAGSPAA 182
Query: 408 NIAKAGPGPA 437
PGP+
Sbjct: 183 PSPPGPPGPS 192
>X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1
protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 297 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPN 476
P A + K P ++KP A G+K AK A+ + + AK+P
Sbjct: 112 PEKAAAAKKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKA-ATGDKKVKKAKSPK 170
Query: 477 TYSMPPVLGEAKEGSKRAAP 536
+ P AK +K+AAP
Sbjct: 171 KVAKPAAKKVAKSPAKKAAP 190
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.0
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 15/193 (7%)
Frame = +3
Query: 132 TTARSVTADFRKSGLTHASSLL----VKQSISCETPMGVRQNPWTPTKRRGPIAAEASSP 299
T+ +T R + SS+L VK ++ P +QN ++ P A +
Sbjct: 318 TSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQNK-AASRPAVPAGGAARNR 376
Query: 300 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAP-- 473
P V+ P G P +KP + Q ++ ++G P S +T G ++A
Sbjct: 377 QPLRVN-P---GTPSTTIKKPPVASSVQRQPPTRARSVDRSGQPPISASTPGKASRADLF 432
Query: 474 NTYSMPPVLGEAKEGSKRAAPAFSITGRG-------KFSEAKGLMPGPGTYTTDRAAA-- 626
N + P V S PA SI +S KG MP G RA +
Sbjct: 433 NRLATPKVTATPTRTS-HEGPASSIRKSAVRPVPSYVYSSYKG-MPSAGGLHGIRAPSKD 490
Query: 627 ALTKRPPAFTMAP 665
T++PPA P
Sbjct: 491 RSTQKPPAAASTP 503
>AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1
protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 297 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPN 476
P A + K P ++KP A G+K AK A+ + + AK+P
Sbjct: 112 PEKAAAAKKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKA-ATGDKKVKKAKSPK 170
Query: 477 TYSMPPVLGEAKEGSKRAAP 536
+ P AK +K+AAP
Sbjct: 171 KVAKPAAKKVAKSPAKKAAP 190
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.0
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 15/193 (7%)
Frame = +3
Query: 132 TTARSVTADFRKSGLTHASSLL----VKQSISCETPMGVRQNPWTPTKRRGPIAAEASSP 299
T+ +T R + SS+L VK ++ P +QN ++ P A +
Sbjct: 318 TSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQNK-AASRPAVPAGGAARNR 376
Query: 300 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAP-- 473
P V+ P G P +KP + Q ++ ++G P S +T G ++A
Sbjct: 377 QPLRVN-P---GTPSTTIKKPPVASSVQRQPPTRARSVDRSGQPPISASTPGKASRADLF 432
Query: 474 NTYSMPPVLGEAKEGSKRAAPAFSITGRG-------KFSEAKGLMPGPGTYTTDRAAA-- 626
N + P V S PA SI +S KG MP G RA +
Sbjct: 433 NRLATPKVTATPTRTS-HEGPASSIRKSAVRPVPSYVYSSYKG-MPSAGGLHGIRAPSKD 490
Query: 627 ALTKRPPAFTMAP 665
T++PPA P
Sbjct: 491 RSTQKPPAAASTP 503
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.7 bits (61), Expect = 3.9
Identities = 35/122 (28%), Positives = 46/122 (37%)
Frame = +3
Query: 279 AAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGM 458
AAEA++ A S+P P P + + APA + P A A+ P PA E
Sbjct: 535 AAEAAAGYDAPSSVPEETPAPAPAADETPAPAPAAEETPAP-APAAEETPAPAP-AAEET 592
Query: 459 TAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTK 638
A AP P A E + APA T + + P P T A A +
Sbjct: 593 PATAPAAEETPAPAPAADE-TPAPAPAAEETPAPAPAVEETPAPAPAVEETPAPAPAAEE 651
Query: 639 RP 644
P
Sbjct: 652 TP 653
Score = 28.3 bits (60), Expect = 5.2
Identities = 27/91 (29%), Positives = 37/91 (40%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 452
P+A E +P PA P+ P + + APA ++ A A+ P PA E
Sbjct: 665 PVAEETPAPAPAAEETPA----PAQAAEETPAPA-PAAEETPASAPAAEETPAPAP-AAE 718
Query: 453 GMTAKAPNTYSMPPVLGEAKEGSKRAAPAFS 545
A AP + P A EG+ AP S
Sbjct: 719 EAPAPAP---AAPETPAPAAEGAAAPAPIVS 746
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +3
Query: 240 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 419
+ P T P + + P P S P + P ES+ P T +DP+ +
Sbjct: 575 EEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASP 634
Query: 420 AGPGP 434
P P
Sbjct: 635 LNPQP 639
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 28.3 bits (60), Expect = 5.2
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Frame = +3
Query: 303 PAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTY 482
P V LP+ P +SR PRAP P+ ++ G PAS + T +P
Sbjct: 360 PPVARLPNSATFPTEKSRLPRAPP---PAVTTPVPRMS-IGSLPASSSNVPRTMSSP--V 413
Query: 483 SMPPVLGEAKEGSKRAAPAFSIT--GRGKFSEAKGLMP-GPGTYTTDRAAAAL---TKRP 644
PV+G + +R A + T + +MP P + A ++ T P
Sbjct: 414 KKTPVMGVSSTAVRRPQSAATTTMPTTSVITNTSAVMPLSPDLEQLEAAIQSMNVVTASP 473
Query: 645 PAFTMA 662
PA++ A
Sbjct: 474 PAYSTA 479
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 273 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 374
P A A + P V P + PPP + P APA
Sbjct: 353 PTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPA 386
Score = 27.5 bits (58), Expect = 9.1
Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
Frame = +3
Query: 183 ASSLLVKQSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP 362
A L SI + P P PT P +P P ++ P PPP P
Sbjct: 330 ARDALNSNSIVPDAPKVEEPEP-APTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPAVP 388
Query: 363 -RAPAFTFGQKLDPLANI--AKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAK 512
A A T + P A I A P + E AP T P GEA+
Sbjct: 389 EEAQAPTPAPEEAPEAQIPAETAQIPPENAVPEAPEEPAPTTTPPPISAGEAE 441
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -3
Query: 356 PRFWRRFTYKGRE---RYYGW 303
PR W + T KGRE R YGW
Sbjct: 645 PRHWNKLTDKGREAFRRIYGW 665
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/75 (30%), Positives = 29/75 (38%)
Frame = +3
Query: 432 PASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTT 611
P SY T AP TY PP + S PA S+ FS+ + + YTT
Sbjct: 36 PPSYPTPKKYPVAP-TYPSPPAYAQKPSYSAPPPPAPSVYSSSSFSDNE--VASDSEYTT 92
Query: 612 DRAAAALTKRPPAFT 656
+ KR A T
Sbjct: 93 ASPNSEYRKRAKART 107
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
PTK+R +A + + G A + + P PE APA L P + A A G
Sbjct: 86 PTKKRR-VARDYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADG- 143
Query: 435 ASYNTEGMTAKA 470
ASY+ G A A
Sbjct: 144 ASYSA-GAAAPA 154
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 377
P + AS+P + SLP+ +P P+SR+ P +
Sbjct: 47 PEPIHNTLNTSASTPSSSAASLPTTPDEPVPDSRRAVLPRY 87
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 240 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP 362
+ P TP+ P+ + SSP P +V P+ P ++ KP
Sbjct: 522 EKPVTPSPSASPLPSPVSSPAPQLVQKPT----TPTDASKP 558
>AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical
protein Y39B6A.11 protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 434
PT + P A + P +V +L + + PR PA Q LD ++ G G
Sbjct: 263 PTSTQAPPIAAQAPPTSSVSNLLAQLAGGSDSDDSPRIPAPAATQNLDYSKFLSNLGVGG 322
Query: 435 ASYNTEGMTA-KAPNTYSMPPVLGEAKEGSKRA 530
+ E A P+ P +G++ + A
Sbjct: 323 GMSSDEDDNAFSRPSYQKSRPAVGKSMAAAMMA 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,406,830
Number of Sequences: 27780
Number of extensions: 321924
Number of successful extensions: 1127
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -