Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m03
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-2|CAB04876.3|  557|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AL032653-1|CAA21714.1|  712|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z82059-2|CAB04876.3|  557|Caenorhabditis elegans Hypothetical
           protein T27E9.5 protein.
          Length = 557

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 462 IFVEPLQF-IYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCWDPTKFVIWNSKDVYTV 638
           I+V  LQF ++ + ++L + L   D +G+   S    E  S+CW+ +   IW+  D +  
Sbjct: 212 IYVIVLQFALFQSFDDLKKILTWLDSEGLGQKSLEEKEYASECWNLSPAKIWSHVDFFAF 271

Query: 639 GEMSSQKIK 665
              +   +K
Sbjct: 272 AHFTGWIMK 280


>Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical
           protein F25H8.6 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 464 IRGATAVYLHKHRGVKSETTAKRLRWDD----IDQPASCRSCVK 583
           IRG T   L K  G  +  TAK  R+ D    I+Q A CR C K
Sbjct: 106 IRGTTEYPLRKRVGGSTVKTAKVWRYFDELPTIEQAAECRICRK 149


>AL032653-1|CAA21714.1|  712|Caenorhabditis elegans Hypothetical
           protein Y54E5B.1a protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 554 QPASCRSCVKVLGPNKICHLELERCVH--SWR-DELSKNKI 667
           Q  SC  CV++  P+      + RCVH  SW  D+  +N +
Sbjct: 499 QQTSCSKCVQLQDPHCAWDSSIARCVHGGSWTGDQFIQNMV 539


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,891
Number of Sequences: 27780
Number of extensions: 344905
Number of successful extensions: 729
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)