Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7m01
         (727 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0556 + 20415683-20416841,20417563-20417726,20417837-204179...    29   3.8  
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285...    28   8.7  

>12_02_0556 +
           20415683-20416841,20417563-20417726,20417837-20417926,
           20427889-20429145
          Length = 889

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/55 (25%), Positives = 30/55 (54%)
 Frame = -1

Query: 700 WYTRFVNIQFRRVPSNRQAGRRHYASSSSHVHWILQPVSSQRRVSRYVYFSLPSL 536
           W  + ++++  RV  NR+ G+     + S+  + L P  + R ++R   +S+PS+
Sbjct: 459 WKDQMISLENLRVMFNREKGKNVSGYAPSNSSFQLNPPLASRELTRAHPWSIPSM 513


>05_05_0237 -
           23526613-23527178,23527979-23528066,23528384-23528527,
           23528674-23528790,23528860-23528970,23530911-23531062,
           23531362-23531450,23531664-23531761
          Length = 454

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 485 FLRGRASLKDELKEEQAEAR 544
           F+RG+ S+KD  KEEQ + R
Sbjct: 177 FIRGKGSIKDPNKEEQLKGR 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,898,048
Number of Sequences: 37544
Number of extensions: 318331
Number of successful extensions: 738
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)