Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7l24
         (377 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056814-1|BAB71289.1|  350|Homo sapiens protein ( Homo sapiens ...    29   5.0  
AL360169-2|CAI16560.1|  678|Homo sapiens RP3-442A17.1 protein.         28   8.8  
AL360169-1|CAI16559.1| 1543|Homo sapiens RP3-442A17.1 protein.         28   8.8  
AL353800-2|CAI20994.1|  678|Homo sapiens RP3-442A17.1 protein.         28   8.8  
AL353800-1|CAI20993.1| 1543|Homo sapiens RP3-442A17.1 protein.         28   8.8  
AF288480-1|AAG01020.1|  678|Homo sapiens tubby super-family prot...    28   8.8  
AF219946-1|AAF87975.1| 1544|Homo sapiens tubby super-family prot...    28   8.8  
AB037818-1|BAA92635.1|  686|Homo sapiens KIAA1397 protein protein.     28   8.8  

>AK056814-1|BAB71289.1|  350|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32252 fis, clone PROST1000167, weakly similar to
           SYNAPSIN I. ).
          Length = 350

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 174 EPSHRGCRAAPVTTFPIYIVY 112
           +PSHRG R  P T FP +I +
Sbjct: 217 QPSHRGARFGPPTPFPGFITH 237


>AL360169-2|CAI16560.1|  678|Homo sapiens RP3-442A17.1 protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 40  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 97


>AL360169-1|CAI16559.1| 1543|Homo sapiens RP3-442A17.1 protein.
          Length = 1543

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 40  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 97


>AL353800-2|CAI20994.1|  678|Homo sapiens RP3-442A17.1 protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 40  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 97


>AL353800-1|CAI20993.1| 1543|Homo sapiens RP3-442A17.1 protein.
          Length = 1543

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 40  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 97


>AF288480-1|AAG01020.1|  678|Homo sapiens tubby super-family protein
           protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 40  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 97


>AF219946-1|AAF87975.1| 1544|Homo sapiens tubby super-family protein
           protein.
          Length = 1544

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 40  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 97


>AB037818-1|BAA92635.1|  686|Homo sapiens KIAA1397 protein protein.
          Length = 686

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +1

Query: 61  FHVHSQIFSSNGRCFTSIYYIDRECSYRRGAAA----TMRGFSCRAALSKWSEPYREL 222
           ++    + + NGR    + +    C   R         +RG +    L +W+EPY++L
Sbjct: 48  YYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKL 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,486,677
Number of Sequences: 237096
Number of extensions: 834991
Number of successful extensions: 1615
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)