Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7l24
         (377 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   2.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   2.1  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   2.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   3.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   8.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 39  RKILISIFSCPQSNFFLEWSVFHIY-ILY 122
           RK +  + S     FF+ W+ FH+  +LY
Sbjct: 255 RKTITRMLSAVVITFFICWAPFHVQRLLY 283


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 278 NILKHACWTSLFLT*YKFGN-SRYGSDHFDKAARHENPLIVAA 153
           +++K A W S   T Y  G+   YG + F + A   N  I AA
Sbjct: 131 DVVKSANW-SYVSTVYSEGSYGEYGIEVFTREATERNVCIAAA 172


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 278 NILKHACWTSLFLT*YKFGN-SRYGSDHFDKAARHENPLIVAA 153
           +++K A W S   T Y  G+   YG + F + A   N  I AA
Sbjct: 221 DVVKSANW-SYVSTVYSEGSYGEYGIEVFTREATERNVCIAAA 262


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 172 TLSSWLPRRAGNYIPDLYSI*M*NTDHSRKKFDC 71
           T++    ++AG  + DL S+   N++   KKF C
Sbjct: 21  TVAILCSQKAGFDLSDLKSMYEANSEEQMKKFGC 54


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 39  RKILISIFSCPQSNFFLEWSVFH 107
           RK +I + S     FF+ W+ FH
Sbjct: 265 RKSVIKMLSAVVILFFICWAPFH 287


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 44  NINLYIFMSTVKFFPRMVGVSHLYT 118
           N+N+     +V  FP   G+  +YT
Sbjct: 915 NVNMLDTYESVHSFPTETGLPFVYT 939


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,291
Number of Sequences: 438
Number of extensions: 1876
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)