Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7l20
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    25   0.78 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   7.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.6  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 204 HLGRGIAVGVIGCSLNFTI 148
           HLG G+AVG  G +  F I
Sbjct: 93  HLGAGLAVGFSGLAAGFAI 111


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 216 PRHDHLGRGIAV 181
           P+HDH GR I++
Sbjct: 541 PKHDHQGRPISI 552


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = +2

Query: 242 WRSWPGLGFGLRCPREPTRAALRTLLRVGMVC 337
           W  WP          +  RA + TLL +   C
Sbjct: 221 WLFWPSFNSAALEGDDQQRAIINTLLSISASC 252


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +1

Query: 391 FCCWTRRENCSTWSW 435
           F CWT     S W W
Sbjct: 270 FICWTPYYVMSLWYW 284


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 225 KGHGTDGDRGR 257
           +GHG  G RGR
Sbjct: 84  RGHGKGGSRGR 94


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 589 PRSSLYPDSRRHHKDVSLIL 530
           P SSL P    HH  +S  L
Sbjct: 275 PNSSLQPSLASHHSHLSSAL 294


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,388
Number of Sequences: 438
Number of extensions: 3261
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)