BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7l07
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 194 4e-50
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 191 3e-49
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 183 7e-47
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 176 6e-45
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 95 3e-20
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 75 4e-14
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973... 29 1.8
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 3.1
11_01_0481 - 3702399-3703062,3703254-3703813 28 4.1
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 28 4.1
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 27 5.4
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 27 5.4
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 27 7.2
02_05_0561 - 29965968-29966326,29966375-29966414,29966877-299669... 27 7.2
12_02_1159 + 26585042-26585441,26585520-26585608,26585670-265857... 27 9.5
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16... 27 9.5
08_02_1281 - 25849918-25851099 27 9.5
06_03_0066 - 16145398-16145475,16145638-16145700,16146432-161465... 27 9.5
02_04_0316 - 21978330-21979397 27 9.5
01_01_0733 - 5715719-5715785,5715908-5715966,5717844-5717884,571... 27 9.5
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 194 bits (472), Expect = 4e-50
Identities = 82/146 (56%), Positives = 109/146 (74%)
Frame = +2
Query: 2 LKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGE 181
++TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GE
Sbjct: 83 IQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGE 142
Query: 182 TPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVL 361
TPY IMFGPDICG TKKVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +L
Sbjct: 143 TPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSIL 202
Query: 362 IDNEKVESGDLEADWDFLPPQENQGP 439
IDN + ++G + DW+ +PP+ + P
Sbjct: 203 IDNTEKQTGSIYDDWNIIPPKNKRDP 228
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 191 bits (465), Expect = 3e-49
Identities = 82/146 (56%), Positives = 109/146 (74%)
Frame = +2
Query: 2 LKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGE 181
++TSED RFYA+S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+
Sbjct: 76 IQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGD 135
Query: 182 TPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVL 361
TPY IMFGPDICG TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +L
Sbjct: 136 TPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTIL 195
Query: 362 IDNEKVESGDLEADWDFLPPQENQGP 439
IDN + +SG + WD LPP++ + P
Sbjct: 196 IDNVEKQSGSIYEHWDILPPKQIKDP 221
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 183 bits (445), Expect = 7e-47
Identities = 74/142 (52%), Positives = 109/142 (76%)
Frame = +2
Query: 2 LKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGE 181
++T+ DAR +A+S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+
Sbjct: 74 IQTTLDARHFAISAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGD 133
Query: 182 TPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVL 361
TPY +MFGPDICG TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L
Sbjct: 134 TPYSLMFGPDICGTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSIL 193
Query: 362 IDNEKVESGDLEADWDFLPPQE 427
+DN + ESG + DWD LPP++
Sbjct: 194 VDNRERESGSMYTDWDILPPRK 215
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 176 bits (429), Expect = 6e-45
Identities = 72/142 (50%), Positives = 105/142 (73%)
Frame = +2
Query: 2 LKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGE 181
++T+ DA+ +A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+
Sbjct: 74 IQTTSDAKHFAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGD 133
Query: 182 TPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVL 361
TPY MFGPDICG TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L
Sbjct: 134 TPYSFMFGPDICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLL 193
Query: 362 IDNEKVESGDLEADWDFLPPQE 427
+DN + E G + DWD LPP++
Sbjct: 194 VDNREREFGSMYTDWDILPPRK 215
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 94.7 bits (225), Expect = 3e-20
Identities = 60/150 (40%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Frame = +2
Query: 2 LKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKD 169
L SE A+ YA+ ++ +P + + +V+QF V+ + ++CGG YLK D + K+
Sbjct: 64 LLVSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKE 123
Query: 170 MHGETPYEIMFGPDICGPGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLI 331
ETPY IMFGPD CG T KVH I +K GK H +K D +H+YT I
Sbjct: 124 FDNETPYTIMFGPDKCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAI 182
Query: 332 VKPDNTYEVLID-NEKVESGDLEADWDFLP 418
+KPDN +L+D EK ++ L AD DF P
Sbjct: 183 LKPDNEVRILVDGEEKKKANFLSAD-DFEP 211
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 74.5 bits (175), Expect = 4e-14
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +2
Query: 260 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPQENQGP 439
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPP++ + P
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDP 574
>06_03_1514 +
30696632-30696724,30696857-30697009,30697226-30697309,
30697451-30697569,30697769-30697870,30699071-30699190,
30699285-30699350,30699563-30699629,30699720-30699773,
30700379-30700534,30701130-30701228
Length = 370
Score = 29.1 bits (62), Expect = 1.8
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Frame = -1
Query: 334 HNQSVQMCVDIIFAADIFFDEVVLTLVTEDYVYLLGSWTTDVRAEHNLIWS-LSVHVLLL 158
HN + M V I ++ D + + ++Y +L + +V HNL WS ++H+L
Sbjct: 88 HNALLAMAVGISQMQNV--DIMARKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILAR 145
Query: 157 Q-----FAVKDLEVSASTV-NVLFMFDSELDDQGF-------TLITERFELTGESIEP 23
FA + L + +F++D +L F +++E E+T +++P
Sbjct: 146 NQTKWWFAKRFLHPDVVAIYGFIFLWDEDLGVDNFDPRRYLDIMVSEGLEITQPALDP 203
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 213 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 70
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>11_01_0481 - 3702399-3703062,3703254-3703813
Length = 407
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 304 IIFAADIFFDEVVLTL-VTEDYVYLLGSWTTDVRAEHNLIWSLSVH 170
+I D FDE+ L + D + + SWT D + +WSL +
Sbjct: 171 VILCGDDLFDEIPPRLQIDGDGDHTMLSWTMDAMIDATELWSLDAY 216
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 169 VLLLQFAVKDLEVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFR 11
V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 603 VFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -1
Query: 370 IVNEDFIGVVGFHNQSVQMCVDI 302
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 39 PVSSNRSVMRVNPWSSSSLSNMNKTLTVEADTSRSLTANWSRRTCT 176
P+SS+ S+M NP S ++ + LTV A ++ S +++ S + T
Sbjct: 5 PISSSLSLMASNPIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSST 50
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 169 VLLLQFAVKDLEVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFR 11
V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 657 VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 709
>02_05_0561 -
29965968-29966326,29966375-29966414,29966877-29966951,
29967003-29967107,29967453-29967592,29967691-29967775
Length = 267
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 244 YVYLLGSWTTDVRAEHNLIWSLSVHVLLLQFAVKDLEV 131
Y+Y + W D R ++N+ ++ H LLQ +D E+
Sbjct: 81 YIYTIVRWDFDNRVKYNIPMEITNHA-LLQLLFQDYEL 117
>12_02_1159 +
26585042-26585441,26585520-26585608,26585670-26585720,
26586189-26586282,26586451-26586512,26586589-26586671,
26586793-26586901,26587010-26587051,26587152-26587316,
26588165-26588341,26588820-26588984,26589069-26589332
Length = 566
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 212 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKD 301
I GPG + I S+ N+LI +D+ KD
Sbjct: 330 IVGPGDELKEFILSFCTHNYLIVQDVELKD 359
>12_01_0022 +
165056-165408,165477-165624,166248-166248,166305-166602,
166819-167387,167554-168377
Length = 730
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +2
Query: 293 CKDDVYTHLYTLIV--KPD-NTYE 355
CK+DV HL TLIV PD N YE
Sbjct: 358 CKEDVLHHLSTLIVLFNPDQNKYE 381
>08_02_1281 - 25849918-25851099
Length = 393
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = -1
Query: 238 YLLGSWTTDV----RAEHNLIWSLSVHVLLLQFAVKDLE 134
Y LG + TDV RA NL+W+L + F +K L+
Sbjct: 217 YKLGEFVTDVGLGRRAGGNLLWNLYLLSFAANFKMKSLQ 255
>06_03_0066 -
16145398-16145475,16145638-16145700,16146432-16146518,
16147168-16147246,16147359-16147478,16149289-16149440
Length = 192
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 29 YALSRKFKPFSNEGKPLVVQFTVK 100
+ R+F +EG+P+VV FT+K
Sbjct: 68 FTSERQFVQLLHEGRPVVVAFTIK 91
>02_04_0316 - 21978330-21979397
Length = 355
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 443 FRVLDFLGAEGSPNRPLGRQIQLS 372
F+ LD L G P P GR+++ S
Sbjct: 170 FKTLDALSRPGQPKPPAGREVRFS 193
>01_01_0733 -
5715719-5715785,5715908-5715966,5717844-5717884,
5718086-5718134,5718427-5718559,5719303-5719384,
5719990-5720472,5720612-5721024,5721260-5721419,
5721541-5721665,5721756-5721811,5721831-5721889,
5722069-5722180,5722952-5723032
Length = 639
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 35 LSRKFKPFSNEGKPLVVQFTVKHEQDI 115
LSR F SN+ K L+ +F KH D+
Sbjct: 90 LSRNFSVSSNDSKRLLQEFVNKHGADL 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,737,124
Number of Sequences: 37544
Number of extensions: 312743
Number of successful extensions: 845
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -