Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7k14
         (531 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1083 - 25922670-25922867,25922962-25923213,25923674-259238...    33   0.11 
07_03_0512 - 18954515-18955972                                         28   4.1  
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525...    28   4.1  
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023...    27   7.1  
12_02_0502 - 19746100-19746185,19746745-19750474                       27   9.4  
04_04_1553 - 34363848-34366058,34369087-34370451                       27   9.4  

>12_02_1083 -
           25922670-25922867,25922962-25923213,25923674-25923856,
           25923945-25924015,25924058-25924169,25924524-25924583,
           25924665-25924780,25925172-25925244
          Length = 354

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
 Frame = -3

Query: 355 YDAIANNIRLRVSTAWESALKMNCRW------QHAKYVPVEGCYVPNCFESSSQYLP 203
           YD  A N+++ V   W   +++N +W      +H K++   GC  PNC +   + +P
Sbjct: 75  YDVTACNLKV-VEGGWSFVVQLNDKWNSCVLKEHDKFLEPVGCLKPNCDKDIPEVVP 130


>07_03_0512 - 18954515-18955972
          Length = 485

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 1   DSPSGSLRCGRWMDAVRY*SLLF 69
           D PS + RC RW+DA    S+LF
Sbjct: 257 DKPSSNARCVRWLDAQPPASVLF 279


>06_01_0721 -
           5255422-5255790,5256287-5256660,5256845-5257192,
           5257369-5257497,5257585-5257658,5257745-5257816,
           5257901-5257969,5258059-5258130,5258208-5258279,
           5258512-5258583,5258735-5258806,5258887-5258958,
           5259050-5259121,5259203-5259274,5259427-5259498,
           5259599-5259670,5259764-5259832,5260072-5260143,
           5260428-5260499,5260579-5260650,5260919-5260990,
           5261015-5261161,5261249-5261378,5262212-5262290
          Length = 931

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 268 KYVPVEGCYVPNCFESSSQYLPRIYLRFGKTISQ 167
           +YV + G  V +C  SS      ++L+FG+ ISQ
Sbjct: 895 EYVSLRGTSVLSCANSSCTSDAELFLKFGEVISQ 928


>02_05_0938 +
           32901143-32901215,32901841-32901982,32902243-32902314,
           32902573-32902644,32902711-32902782,32902913-32902948,
           32903001-32903072,32903319-32903387,32903483-32903554,
           32903668-32903739,32903838-32903909,32904153-32904224,
           32904470-32904541,32904623-32904694,32904782-32904853,
           32904911-32905003,32905150-32905218,32905315-32905386,
           32905479-32905552,32905643-32905771,32905966-32906331,
           32906584-32906954,32907522-32907890
          Length = 884

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 268 KYVPVEGCYVPNCFESSSQYLPRIYLRFGKTISQ 167
           +YV + G    +C  SSS     ++L+FG+ ISQ
Sbjct: 848 EYVSLRGGSTLSCENSSSASDAELFLKFGEVISQ 881


>12_02_0502 - 19746100-19746185,19746745-19750474
          Length = 1271

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 349  RHINKYIMDDTHKLIASTCQFLSQSSH--AFRLDGCIYTTRI 468
            RH+   ++   H+  ASTC+ LS  S      ++ C + T +
Sbjct: 907  RHVGLAVLPRLHQAYASTCESLSVDSRLSLLHIESCAHLTSL 948


>04_04_1553 - 34363848-34366058,34369087-34370451
          Length = 1191

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 193 DKFAADTVTNSQSNLERNSLQQGRILHAAIGSSF*EQTPMRLKHEVGYC 339
           D F+  +  NS + L    L+QG +LHA +  S      + L+ + G C
Sbjct: 428 DSFSLSSALNSTTELA--GLKQGEMLHAQVEMSLLSHFCLCLQRKAGSC 474


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,570,431
Number of Sequences: 37544
Number of extensions: 257203
Number of successful extensions: 518
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)