Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7k13
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0076 + 627796-627877,628706-628944,629129-629326,629415-62... 35 0.065
01_01_0760 + 5860893-5861065,5861549-5862443 33 0.20
11_01_0075 + 591537-591618,592410-592648,592840-593037,593129-59... 32 0.35
10_07_0020 - 11944054-11944653,11944734-11944847,11944917-119449... 31 1.1
07_01_0773 + 5963165-5963306,5963440-5963489,5963580-5963645,596... 30 1.4
01_01_0595 - 4430738-4430785,4430904-4432679 30 1.4
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 29 3.2
05_03_0566 - 15521494-15521511,15521550-15521747,15521856-155220... 29 4.3
11_01_0474 - 3666236-3668050 28 5.6
09_03_0016 - 11552732-11552835,11553685-11553811,11553918-115541... 28 5.6
11_01_0593 - 4705565-4705822,4705916-4706065,4706160-4706307,470... 28 7.5
07_03_0347 + 17036086-17036206,17036548-17037173 28 7.5
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667... 27 9.9
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 27 9.9
05_01_0044 + 307711-307883,308001-308063,308200-308316,308558-30... 27 9.9
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555... 27 9.9
>12_01_0076 +
627796-627877,628706-628944,629129-629326,629415-629474,
629596-629739,631700-631864,632636-632734,633114-633182,
633274-633370,633994-634085,635021-635152,635446-635526,
636284-636400,636497-636598
Length = 558
Score = 34.7 bits (76), Expect = 0.065
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 492 FNKASDKCKDVALSRLSADENSCVKCEKIIDEIFGK----DAKWD-DKYMLGEC 638
F K C+D+AL E++CV C IIDEI K DA+++ + +L EC
Sbjct: 131 FCKQYGLCRDMALLSAMKSESTCVFCHHIIDEIMSKLKDPDAEFEIIQLLLKEC 184
>01_01_0760 + 5860893-5861065,5861549-5862443
Length = 355
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Frame = +3
Query: 204 FYFVFHSPTAIHTVKLPKILV*QR------------RYTTFESAKSVTPSIPVVKLVLGI 347
F F+F+ A + LP +V +R +YTT A + SIPV+ L +
Sbjct: 35 FIFIFYRQAAASVLLLPLAIVLERSTGTLNLYNMGLKYTTSTVASAAGSSIPVMSFFLAL 94
Query: 348 AILQSKLQKSTKSGSEDEAKCAKCKK---IIDLVFGPN-KPIVH 467
+ Q ++ + GS A C +I L GP P++H
Sbjct: 95 LLRQEMIRLRSLPGSAKAAGVGLCLAGVLVIALYTGPTISPLIH 138
>11_01_0075 +
591537-591618,592410-592648,592840-593037,593129-593188,
593313-593456,594655-594819,595611-595709,596057-596125,
596216-596312,596922-597013,597085-597255,598053-598184,
598479-598559,599131-599247,599344-599433
Length = 611
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 492 FNKASDKCKDVALSRLSADENSCVKCEKIIDEIFGK----DAKWD-DKYMLGEC 638
F K C+D+AL E++C+ C IIDEI K DA+++ + +L EC
Sbjct: 131 FCKQYGLCRDMALLSAVKSESTCLFCHHIIDEITSKLKDPDAEFEIIQLLLKEC 184
>10_07_0020 -
11944054-11944653,11944734-11944847,11944917-11944976,
11945154-11945474,11945556-11945594
Length = 377
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 604 ASLPKISSIIFSHLTQLFSSALNLDKATSLHLSLALLKTCASLESSCTIGLLGPNTKSII 425
A KI ++I L + A+ L++ LS + K C + S LLG + ++ +
Sbjct: 238 AQFAKIQALIPDDLANTITPAVYLEQHQLKPLSKPIGKLCMKKKPSLINSLLGQSNRTDL 297
Query: 424 FLHLAHLASSSDPLFVLFCSLLCKIAIPKTNLTTGMDGVTDLADS-KVV 281
L ++ D +L + K+ L + + V D+ S KV+
Sbjct: 298 IAQLEECSAKLDLEMQKLANLPSAVEEHKSRLRSAIKNVADMTKSLKVI 346
>07_01_0773 +
5963165-5963306,5963440-5963489,5963580-5963645,
5964162-5964188,5965320-5965375,5966613-5966681,
5966901-5966995,5967141-5967251,5970545-5970879,
5971218-5971253,5971254-5971421
Length = 384
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -1
Query: 574 FSHLTQLFSSALNLDKATSLHLSLALLKTCASLESSCTIGLLGPNTKSIIFL-HLAHLAS 398
F+ + ++ SS L++ A + L K SL + N ++FL ++L S
Sbjct: 68 FNRVRRVLSSVLSVSYAVRRTFFITLKKCPNSLSVNILTIYYWLNAWMVLFLIEYSNLMS 127
Query: 397 SSDPLFVLFCSLLCKIAIPKTNLTTGMDGVTD 302
+ P+F FCS+ + +N +DG +D
Sbjct: 128 LTFPIFFTFCSVRLDESSSLSNNIPQLDGSSD 159
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 375 STKSGSEDEAKCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKD 521
S +G ED+ A+ KI + P KPI HE+ K+ + S+ C++
Sbjct: 287 SVANGVEDDYARAEASKIQEKPKIPEKPINHEEIKEQVSKKQRSNTCRE 335
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 155 MWTAAVRTVNKANPAAFLFRISLADCNTHGKIAKNFGLTATLYYLRIC--QIGYTVHTS 325
+W VR ++ + + L++ N HG I+ NF L L YL + Q+ T+ +S
Sbjct: 415 VWNG-VRCSTGSDNTMRIISLDLSNSNLHGSISNNFTLLTALEYLNLSGNQLSGTIPSS 472
>05_03_0566 -
15521494-15521511,15521550-15521747,15521856-15522037,
15522643-15522721
Length = 158
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 492 FNKASDKCKDVALSRLSADENSCVKCEKIIDEI 590
F ++ C V RL E+SC C +++DEI
Sbjct: 111 FCESVSLCHKVTFIRLPRHEDSCDLCHEVVDEI 143
>11_01_0474 - 3666236-3668050
Length = 604
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 65 NKKNHIPI-QKENENVVFN*SYTHHF*FRYKMWTAAVRTVNKANPAAFLFRISLADC 232
+K+ + P+ + +++ Y H + + K W + T NK P+ F ++ + C
Sbjct: 393 HKRPYYPVVSTRDSHIICFLVYDHDYCVKEKFWKIMLDTTNKTLPSVFAYKNQSSPC 449
>09_03_0016 -
11552732-11552835,11553685-11553811,11553918-11554144,
11554247-11554401,11554538-11554615,11555452-11555523,
11555631-11555789,11556873-11556979
Length = 342
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 206 LFRISLADCNTHGKIAKNFGLTATLYYLRI 295
+ I L++ N HG I+ NF L L YL +
Sbjct: 86 IISIDLSNSNLHGVISSNFTLLTALEYLNL 115
>11_01_0593 -
4705565-4705822,4705916-4706065,4706160-4706307,
4706400-4706479,4706573-4706739,4706830-4707078,
4707161-4707733,4707833-4707972,4708064-4708185,
4708622-4708743,4708877-4709105
Length = 745
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 444 GPNKPIVHEDSKDAHVF--NKASDKCKDVALSRLSADENSCVKCEKI 578
G N+P++H D K +++ K D L+ D S + C +
Sbjct: 510 GNNRPVIHRDVKSSNILISQDFEPKLSDFGLALWDTDATSQITCNDV 556
>07_03_0347 + 17036086-17036206,17036548-17037173
Length = 248
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 221 VKYEIEMPPGSLYLPSSPRRSTFC 150
V ++ PPGS+ ++P RS+FC
Sbjct: 32 VACSVQTPPGSIKKATTPMRSSFC 55
>10_02_0200 -
6672743-6673717,6676257-6676634,6677017-6677301,
6677420-6677570,6677696-6677930,6678689-6678764
Length = 699
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 450 NKPIVHEDSKDAHVF--NKASDKCKDVALSRLSADENS 557
NKPI+H D K +++ + K D LSRL +E +
Sbjct: 56 NKPIIHLDLKPSNILLDDNLLPKIADFGLSRLFGEEQT 93
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 348 AILQSKLQKSTKSGSEDEAKCAKCKKIIDLVFGPNKPIVHEDSKDAHVFNKASDKCKDV 524
A+++SK S KS E+ +K + + FG + P V + +DA+ N + + K +
Sbjct: 833 AVMKSKRAPSRKSAEEN----SKADSMANAAFGSDLPTVASEDRDANNGNVKNGRLKSM 887
>05_01_0044 +
307711-307883,308001-308063,308200-308316,308558-309359
Length = 384
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 276 RYTTFESAKSVTPSIPVVKLVLGIAILQSKLQKSTKSGSEDEAKCAKCKK---IIDLVFG 446
+YT+ A + + S+PVV L + + ++ T SG A A C +I L G
Sbjct: 92 KYTSATVASATSNSVPVVTFFLAVLLRLEVIRLRTLSGVAKAAGVALCLAGVLVIALYAG 151
Query: 447 PN-KPIVH 467
P P+ H
Sbjct: 152 PAISPLNH 159
>01_07_0112 - 41149461-41151674,41151688-41153265,41154344-41155507,
41155807-41156293,41156603-41156759,41157303-41157378
Length = 1891
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 218 KYEIEMPPGSLYLPSSPRRSTFCIETRSDGC 126
K+ I P YLP S ++ IE R DGC
Sbjct: 1468 KFVISNCPKLTYLPESMKKLATLIELRLDGC 1498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,385,029
Number of Sequences: 37544
Number of extensions: 330578
Number of successful extensions: 901
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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