Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7k13
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    24   1.5  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    24   1.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   6.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.0  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -3

Query: 296 RFEGSIASLSNQNFWQFYRVYCSRRVKYEIEMPPGSLYLPSSPRRSTFCIETRSDGCN 123
           +FEG    +S  NF +F +V   + +   +  P  S  L  +    TF   T S G N
Sbjct: 1   QFEGKFQFVSQNNFEEFAKVLGDQNLVNTVLQPRPSFELSKNGDEWTF---TSSSGDN 55


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -3

Query: 296 RFEGSIASLSNQNFWQFYRVYCSRRVKYEIEMPPGSLYLPSSPRRSTFCIETRSDGCN 123
           +FEG    +S  NF +F +V   + +   +  P  S  L  +    TF   T S G N
Sbjct: 3   QFEGKFQFVSQNNFEEFAKVLGDQNLVNTVLQPRPSFELSKNGDEWTF---TSSSGDN 57


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 400 SSSDPLFVLFCSLLCKIAIPKTNLTTGMDGVTDLA 296
           +S DPL    CS L ++ +    LT+  D + DLA
Sbjct: 420 ASIDPLAFRNCSDLKELDLSGNELTSVPDALRDLA 454


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 451 LGPNTKSIIFLHLA 410
           L PN KS+ +LH+A
Sbjct: 515 LNPNEKSLHYLHIA 528


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 451 LGPNTKSIIFLHLA 410
           L PN KS+ +LH+A
Sbjct: 515 LNPNEKSLHYLHIA 528


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 450 NKPIVHEDSKDAH 488
           N+P+V +DSK+ H
Sbjct: 169 NEPVVLDDSKEEH 181


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 431 DYFLTFSAFSLVFGSALCALL*FALQ 354
           + +  +S F  VFG A C +  FA +
Sbjct: 110 EIYYIWSHFPYVFGEAFCIIQSFAAE 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,181
Number of Sequences: 438
Number of extensions: 3214
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)