Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7k12
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0143 - 944169-947273 33 0.21
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 30 2.0
10_03_0044 + 7328777-7328923,7329048-7329074 30 2.0
07_03_1248 - 25165929-25166891,25169159-25169473 30 2.0
03_04_0133 + 17585278-17585282,17586257-17586386,17587444-175875... 30 2.0
03_03_0012 + 13737898-13740031,13740347-13740486 29 2.6
02_05_1221 - 35023734-35023868,35024002-35024217,35024349-350246... 29 2.6
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 28 6.0
04_04_0168 + 23259459-23260001,23260883-23262780,23263000-232631... 28 6.0
03_01_0250 - 1937650-1939071,1939375-1939468,1939665-1939870,193... 28 8.0
>05_01_0143 - 944169-947273
Length = 1034
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 94 LTEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNKLEILYERIKTISS 249
L +++++ L +L+ K K+TE+ET+ E LN++ + +++ +S
Sbjct: 644 LQDKEKVLLTEYTSILRNYKNEKRKLTEVETKNQERLNEMSAMISELRSANS 695
>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 29.9 bits (64), Expect = 2.0
Identities = 35/177 (19%), Positives = 72/177 (40%), Gaps = 4/177 (2%)
Frame = +1
Query: 130 EKVLKFIKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVE 309
E++ ++ N + + + EL +LE+ +E K S Q ++M A + SSN
Sbjct: 726 ERLNSIVQALENDIEKEKALHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNT---- 781
Query: 310 SVITPEEVVLVLSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKA----FTQK 477
V+ ++V L N + K+ L + + + + +E+ ++A F +
Sbjct: 782 EVLKLRDIVKALE--------NEVEKEKALHEDLSAQLEAKIEAERTFSVEAIKESFQSE 833
Query: 478 LKTSENPKVNLRLIFKAAADSELKLSALSTPILGNVNILRYLSLAYPTIIPYDHNDH 648
L++ + V LR + A +K S + + L + + I H D+
Sbjct: 834 LQSVNSEVVELRGMVTALEHEVVKEKTFSAELQMQLEALEAIKRVLESEIESAHQDN 890
>10_03_0044 + 7328777-7328923,7329048-7329074
Length = 57
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 46 KIELPKCMYHIKNPIDL--TEEDEICLKINEKVLKFIKG 156
KI++PKC HI+ PI L + +IC++ V +++ G
Sbjct: 12 KIKMPKCWNHIRTPITLLISNVRQICIRAPFWVHEYLMG 50
>07_03_1248 - 25165929-25166891,25169159-25169473
Length = 425
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 190 QDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPWY 369
+D LLNK I R++ Q + N SNA+ ++ + SLP Y
Sbjct: 135 EDMLLNKKHIFVPRVEPTPHQIEETEDDYNDDGSNANVASPNSNYDQD--LFGSISLPHY 192
Query: 370 LNIILKKSNLPIHTTCHVHSSVPSEK 447
+++L +++L +H H + K
Sbjct: 193 QDMLLNQNHLSVHRVEPAHDQLEKIK 218
>03_04_0133 +
17585278-17585282,17586257-17586386,17587444-17587591,
17587661-17587849,17587999-17589150,17589303-17589466
Length = 595
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 34 DHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNK 168
D D +E P Y++ NP+ ED K+ + + GP+ K
Sbjct: 442 DEDSAVESPAHDYYVNNPMSPESEDSFHEKVADSLSGLRDGPSQK 486
>03_03_0012 + 13737898-13740031,13740347-13740486
Length = 757
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +1
Query: 241 ISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPWYLNIILKKSNLPI 405
ISS CKL N +++ S + P+ VV ++ Y +++ K +
Sbjct: 508 ISSNCKLQNWPSSLNDDGWSGTSFLFLPDHVVTIMRFHIATCYCELVMHKEGFSV 562
>02_05_1221 -
35023734-35023868,35024002-35024217,35024349-35024675,
35024845-35025218,35025560-35025647,35025767-35025910,
35026053-35026178,35026264-35026412,35026539-35026644,
35026757-35026900,35027018-35027194,35027304-35027453,
35027570-35027788
Length = 784
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 94 LTEEDEICLKINEKVLKFIKGPNNKMT 174
+TEED + L EKV+KF+ NN T
Sbjct: 711 ITEEDRVILNNVEKVVKFLTAGNNPTT 737
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Frame = +1
Query: 34 DHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKG---------PNNKMTELET 186
D + E+ K + IKN I+ E++ K+NE++ K G ++ E +
Sbjct: 390 DGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKL 449
Query: 187 RQDELLNKLEILYERIKTISSQCKLDNMSANIQS--SNASKVESVITPEEVVLVLS 348
R ++ LN + E + C L ++A + + N E + E V LS
Sbjct: 450 RVEDALNATKAAVEEGIVVGGGCTLLRLAARVDAIKDNLENDEQKVGAEIVRRALS 505
>04_04_0168 +
23259459-23260001,23260883-23262780,23263000-23263150,
23263851-23264669
Length = 1136
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 157 PNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSA-NIQSSNASKVESVIT 321
P + +L D KLE+L+E +K C LD M A +Q + A ++ + I+
Sbjct: 139 PGKRRVDLYLEHDSQRYKLEVLFEDMKDCLG-CTLDGMGAILLQLNYAPRIHTAIS 193
>03_01_0250 -
1937650-1939071,1939375-1939468,1939665-1939870,
1939986-1940132
Length = 622
Score = 27.9 bits (59), Expect = 8.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 49 IELPKCMYHIKNPIDLTEEDEICLKIN 129
+E +CM+H+K P+ ++CL ++
Sbjct: 197 MESQRCMHHVKEPVFFPSLQKLCLTVD 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,779,126
Number of Sequences: 37544
Number of extensions: 266706
Number of successful extensions: 798
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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