Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7k07
         (186 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    26   4.1  
U53149-4|AAA96120.1|  956|Caenorhabditis elegans Patched related...    26   4.1  
AF016686-13|AAB66233.1|  470|Caenorhabditis elegans Hypothetical...    26   4.1  
Z82069-4|CAB04905.1|  290|Caenorhabditis elegans Hypothetical pr...    25   7.1  
Z29121-1|CAA82387.3|  324|Caenorhabditis elegans Hypothetical pr...    25   7.1  
D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...    25   7.1  
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...    25   7.1  

>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 56  FYLIT--FLYSIIP*TSTAGLWNVILSCNWNVFKEIK 160
           +YL+T  F+ SII  T   G + V+L   W  FK ++
Sbjct: 40  YYLVTTLFVVSIIASTLLTGSFLVLLLLLWKHFKSVR 76


>U53149-4|AAA96120.1|  956|Caenorhabditis elegans Patched related
           family protein 1 protein.
          Length = 956

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 102 VDVYGMIEYKNVIK*KYNPKSGCTDNYSI 16
           VD  G  +Y + I+  YN + G  D Y I
Sbjct: 216 VDEEGHFDYASAIRLTYNTREGKVDQYGI 244


>AF016686-13|AAB66233.1|  470|Caenorhabditis elegans Hypothetical
           protein R07C3.3 protein.
          Length = 470

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 55  FLFNNVFIFYHPIDVHCWALECNS 126
           F+   V   YHP +V C+A++ NS
Sbjct: 143 FIEKQVQASYHPQNVFCFAIDANS 166


>Z82069-4|CAB04905.1|  290|Caenorhabditis elegans Hypothetical
           protein W04A8.5 protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 134 NWNVFKEIKSYVFE 175
           NWNVF++++ Y F+
Sbjct: 179 NWNVFEKVRKYNFQ 192


>Z29121-1|CAA82387.3|  324|Caenorhabditis elegans Hypothetical
           protein ZK757.1 protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 38  PLLGLYFYLITFLYSII 88
           PL  L FYL+ FL+S++
Sbjct: 70  PLFFLQFYLVVFLWSLV 86


>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 93  YGMIEYKNVIK*KYNPKSGCTDNYSI 16
           Y  I YKN +   +NPKS  T  +S+
Sbjct: 177 YAKIAYKNHLHSVHNPKSQFTKEFSL 202


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 93  YGMIEYKNVIK*KYNPKSGCTDNYSI 16
           Y  I YKN +   +NPKS  T  +S+
Sbjct: 177 YAKIAYKNHLHSVHNPKSQFTKEFSL 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,529,812
Number of Sequences: 27780
Number of extensions: 75501
Number of successful extensions: 161
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 12,740,198
effective HSP length: 42
effective length of database: 11,573,438
effective search space used: 219895322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)