Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7k07
         (186 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   7.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   7.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   7.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          18   9.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    18   9.5  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 38  PLLGLYFYLITFL 76
           PLLG YF  I F+
Sbjct: 292 PLLGTYFNCIMFM 304


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 172 EHIRFYFLEDIPITT 128
           E+   YF+EDI + T
Sbjct: 217 ENKLIYFIEDIGLNT 231


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 76   IFYHPIDVHCWALECNS 126
            I Y PI+   W L  NS
Sbjct: 1534 IQYRPINEFHWTLVSNS 1550


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 76   IFYHPIDVHCWALECNS 126
            I Y PI+   W L  NS
Sbjct: 1530 IQYRPINEFHWTLVSNS 1546


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 157 YFLEDIPITT 128
           YF+EDI + T
Sbjct: 222 YFIEDIGLNT 231


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 53  IILKVVVQITTAFYLFI 3
           ++  ++VQI  A Y FI
Sbjct: 88  LLFILLVQIAVAVYAFI 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,229
Number of Sequences: 438
Number of extensions: 1203
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)