Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7k05
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65158-1|CAA46276.1|  469|Drosophila melanogaster developmental ...    28   9.0  
M92841-1|AAA28673.1|  469|Drosophila melanogaster LIM-homeodomai...    28   9.0  
BT005201-1|AAO61758.1|  469|Drosophila melanogaster HL02012p pro...    28   9.0  
AY069815-1|AAL39960.1|  468|Drosophila melanogaster SD05618p pro...    28   9.0  
AE013599-103|AAM68357.2|  246|Drosophila melanogaster CG8376-PB,...    28   9.0  
AE013599-102|AAF57314.1|  469|Drosophila melanogaster CG8376-PA,...    28   9.0  

>X65158-1|CAA46276.1|  469|Drosophila melanogaster developmental
           regulatory protein protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PSGNRKKGRPRSR*ADDIEG-TAGID 318
           P   R+KGRPR R   DIE  TA ID
Sbjct: 322 PQPARQKGRPRKRKPKDIEAFTANID 347


>M92841-1|AAA28673.1|  469|Drosophila melanogaster LIM-homeodomain
           apterous protein protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PSGNRKKGRPRSR*ADDIEG-TAGID 318
           P   R+KGRPR R   DIE  TA ID
Sbjct: 322 PQPARQKGRPRKRKPKDIEAFTANID 347


>BT005201-1|AAO61758.1|  469|Drosophila melanogaster HL02012p
           protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PSGNRKKGRPRSR*ADDIEG-TAGID 318
           P   R+KGRPR R   DIE  TA ID
Sbjct: 322 PQPARQKGRPRKRKPKDIEAFTANID 347


>AY069815-1|AAL39960.1|  468|Drosophila melanogaster SD05618p
           protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PSGNRKKGRPRSR*ADDIEG-TAGID 318
           P   R+KGRPR R   DIE  TA ID
Sbjct: 321 PQPARQKGRPRKRKPKDIEAFTANID 346


>AE013599-103|AAM68357.2|  246|Drosophila melanogaster CG8376-PB,
           isoform B protein.
          Length = 246

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PSGNRKKGRPRSR*ADDIEG-TAGID 318
           P   R+KGRPR R   DIE  TA ID
Sbjct: 99  PQPARQKGRPRKRKPKDIEAFTANID 124


>AE013599-102|AAF57314.1|  469|Drosophila melanogaster CG8376-PA,
           isoform A protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 244 PSGNRKKGRPRSR*ADDIEG-TAGID 318
           P   R+KGRPR R   DIE  TA ID
Sbjct: 322 PQPARQKGRPRKRKPKDIEAFTANID 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,850,174
Number of Sequences: 53049
Number of extensions: 371800
Number of successful extensions: 607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)