BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7j16
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S40234-1|AAB22578.2| 308|Homo sapiens mast cell carboxypeptidas... 30 7.3
M73720-1|AAA59568.1| 417|Homo sapiens carboxypeptidase A protein. 30 7.3
M27717-1|AAA35652.1| 417|Homo sapiens protein ( Human mast cell... 30 7.3
BC012613-1|AAH12613.1| 417|Homo sapiens carboxypeptidase A3 (ma... 30 7.3
>S40234-1|AAB22578.2| 308|Homo sapiens mast cell carboxypeptidase A
protein.
Length = 308
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 392 TKIRLKPHRLSKNTSPKLL*IDLNAAFSLIWNCITNS 502
TK R+ SKN + K + DLN F+ WN I N+
Sbjct: 119 TKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNT 155
>M73720-1|AAA59568.1| 417|Homo sapiens carboxypeptidase A protein.
Length = 417
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 392 TKIRLKPHRLSKNTSPKLL*IDLNAAFSLIWNCITNS 502
TK R+ SKN + K + DLN F+ WN I N+
Sbjct: 228 TKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNT 264
>M27717-1|AAA35652.1| 417|Homo sapiens protein ( Human mast cell
carboxypeptidase A mRNA, complete cds. ).
Length = 417
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 392 TKIRLKPHRLSKNTSPKLL*IDLNAAFSLIWNCITNS 502
TK R+ SKN + K + DLN F+ WN I N+
Sbjct: 228 TKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNT 264
>BC012613-1|AAH12613.1| 417|Homo sapiens carboxypeptidase A3 (mast
cell) protein.
Length = 417
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 392 TKIRLKPHRLSKNTSPKLL*IDLNAAFSLIWNCITNS 502
TK R+ SKN + K + DLN F+ WN I N+
Sbjct: 228 TKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNT 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,634,737
Number of Sequences: 237096
Number of extensions: 1485289
Number of successful extensions: 2993
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2993
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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