Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7j07
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 41 0.005
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 41 0.005
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 41 0.005
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 41 0.005
BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S. cer... 31 3.0
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 31 3.0
BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein. 31 3.0
BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein. 31 3.0
BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein. 31 3.0
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 31 3.0
AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protei... 31 3.0
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 31 3.0
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 187 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVIN 354
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +N
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVN 67
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 187 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVIN 354
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +N
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVN 67
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 187 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVIN 354
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +N
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVN 67
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 187 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVIN 354
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +N
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVN 67
>BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 134
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protein
protein.
Length = 135
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 216 SKPYYHNIRFSSRRC*KIVKHMQTKHTTNFGSKESNINEVFCAGD*RLDNMLNRGIPAKT 395
+KP Y S ++C ++ ++ +HT F FC+ LD++L G+P
Sbjct: 71 NKPRYAGTSESHKKC-TALELLEQEHTQGFII-------TFCSA---LDDILGGGVPLMK 119
Query: 396 ITELCGIAGSG 428
TE+CG G G
Sbjct: 120 TTEICGAPGVG 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,232,753
Number of Sequences: 237096
Number of extensions: 1945441
Number of successful extensions: 10508
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10508
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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