Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7i18
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057394-1|AAH57394.1| 1562|Homo sapiens Rho guanine nucleotide ...    29   9.8  
BC047240-1|AAH47240.1|  855|Homo sapiens HEAT repeat containing ...    29   9.8  
AL356104-3|CAH72939.1| 1562|Homo sapiens Rho guanine nucleotide ...    29   9.8  
AL356104-2|CAH72940.1| 1522|Homo sapiens Rho guanine nucleotide ...    29   9.8  
AL157713-2|CAH70128.1| 1562|Homo sapiens Rho guanine nucleotide ...    29   9.8  
AL157713-1|CAH70127.1| 1522|Homo sapiens Rho guanine nucleotide ...    29   9.8  
AB002378-1|BAA20834.2| 1539|Homo sapiens KIAA0380 protein protein.     29   9.8  

>BC057394-1|AAH57394.1| 1562|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 11 protein.
          Length = 1562

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 126 RNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQ 305
           R+RSD ++       D A E T  H  + S  S  S     NP           S+ S  
Sbjct: 672 RSRSDVDM-------DAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPS 724

Query: 306 TGSCVDDVTPH 338
            G C D + PH
Sbjct: 725 LGFCTDTLLPH 735


>BC047240-1|AAH47240.1|  855|Homo sapiens HEAT repeat containing 2
           protein.
          Length = 855

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 192 HYHSDSDSVASRKSKT-RYINPAIYVEKIEATHSVTSLQTGSCVDDVTPH 338
           H+H  S+S+     +T  + +  + V  IEAT +V     G  VDDV  H
Sbjct: 200 HFHMQSESLIGPLMQTISHQHWKVRVAAIEATGAVIHFGNGKSVDDVLSH 249


>AL356104-3|CAH72939.1| 1562|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 11 protein.
          Length = 1562

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 126 RNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQ 305
           R+RSD ++       D A E T  H  + S  S  S     NP           S+ S  
Sbjct: 672 RSRSDVDM-------DAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPS 724

Query: 306 TGSCVDDVTPH 338
            G C D + PH
Sbjct: 725 LGFCTDTLLPH 735


>AL356104-2|CAH72940.1| 1522|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 11 protein.
          Length = 1522

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 126 RNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQ 305
           R+RSD ++       D A E T  H  + S  S  S     NP           S+ S  
Sbjct: 632 RSRSDVDM-------DAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPS 684

Query: 306 TGSCVDDVTPH 338
            G C D + PH
Sbjct: 685 LGFCTDTLLPH 695


>AL157713-2|CAH70128.1| 1562|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 11 protein.
          Length = 1562

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 126 RNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQ 305
           R+RSD ++       D A E T  H  + S  S  S     NP           S+ S  
Sbjct: 672 RSRSDVDM-------DAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPS 724

Query: 306 TGSCVDDVTPH 338
            G C D + PH
Sbjct: 725 LGFCTDTLLPH 735


>AL157713-1|CAH70127.1| 1522|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 11 protein.
          Length = 1522

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 126 RNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQ 305
           R+RSD ++       D A E T  H  + S  S  S     NP           S+ S  
Sbjct: 632 RSRSDVDM-------DAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPS 684

Query: 306 TGSCVDDVTPH 338
            G C D + PH
Sbjct: 685 LGFCTDTLLPH 695


>AB002378-1|BAA20834.2| 1539|Homo sapiens KIAA0380 protein protein.
          Length = 1539

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 126 RNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQ 305
           R+RSD ++       D A E T  H  + S  S  S     NP           S+ S  
Sbjct: 649 RSRSDVDM-------DAAAEATRLHQSASSSTSSLSTRSLENPTPPFTPKMGRRSIESPS 701

Query: 306 TGSCVDDVTPH 338
            G C D + PH
Sbjct: 702 LGFCTDTLLPH 712


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,942,166
Number of Sequences: 237096
Number of extensions: 1630115
Number of successful extensions: 3146
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3146
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)