Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7i11
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   0.35 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    26   0.35 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         24   1.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.3  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   5.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 158 VLVWIYICWIYTALLAVTALCIVCILRK 241
           +L  + +C++ T LL  T   + CIL++
Sbjct: 557 LLAGVLVCYLNTFLLLATPTTVTCILQR 584


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 158 VLVWIYICWIYTALLAVTALCIVCILRK 241
           +L  + +C++ T LL  T   + CIL++
Sbjct: 647 LLAGVLVCYLNTFLLLATPTTVTCILQR 674


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 299 RAQRMECEVDAGSSGWKNVVSSECR-QCKVR*QPAALCISSKCKSRR 162
           R +R+ C+V +  S W ++  S C  +C  + +    C +  C  R+
Sbjct: 58  RHRRVTCDVLSWQSKWLSINHSACAIRCLAQRRKGGSCRNGVCICRK 104


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 440 ESSGNEFELNPPRQSIGHIGKRIFDQ 517
           ++S +EF++ P R  +GH    + D+
Sbjct: 299 QNSYHEFQILPERGELGHCTASVMDE 324


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 175 VNPDEYSIIFLHAHGP 128
           +NP+E S+ +LH  GP
Sbjct: 515 LNPNEKSLHYLHIAGP 530


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 175 VNPDEYSIIFLHAHGP 128
           +NP+E S+ +LH  GP
Sbjct: 515 LNPNEKSLHYLHIAGP 530


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
          protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 80 IIKFEKKKRYITLNNFDGMLK 18
          +++FE K ++++ NNF+   K
Sbjct: 1  MVQFEGKFQFVSQNNFEEFAK 21


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 553 PRKAHSFNFLKLLIKYTFANVSNRLSRRIQ 464
           PR+   F  +   +K+T       LSRRI+
Sbjct: 440 PRRKFHFKQIARAVKFTSKLFGRALSRRIK 469


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,809
Number of Sequences: 438
Number of extensions: 3649
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)