Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7i06
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 86 4e-18
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.27
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.62
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 28 1.4
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 1.9
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 1.9
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 27 2.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.5
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 3.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 27 3.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.3
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.8
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 26 5.8
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 25 7.7
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 86.2 bits (204), Expect = 4e-18
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 14/120 (11%)
Frame = +2
Query: 89 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFS 268
MD++ +LE+LSLVSK+ +E+ NH G++D LAEFII+L D++ ++ FK ++ G EF+
Sbjct: 1 MDDLKELEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFT 60
Query: 269 DSFMTNLLRIIQHMKP--------VNTSTLIKNIAETESENP------LAKKFPGLAIPN 406
DSF+ N+ R+I+ +KP VN + N A + ++ K FPGL+IPN
Sbjct: 61 DSFLQNISRLIKEIKPKDDIPTDNVNNGSNSVNGASHDLDSKDVDKQHQRKMFPGLSIPN 120
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 30.3 bits (65), Expect = 0.27
Identities = 23/92 (25%), Positives = 44/92 (47%)
Frame = -2
Query: 351 SAIFLINVDVFTGFMCCIIRSRFVMKESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSL 172
+A L+ DV G + S V + N S+N+T +++ G +S S+ + +
Sbjct: 101 NAQLLVLDDVSFGVFSSLANS--VTGYASNYTQSSSNSTSTMNSTGSVSGGSVYPTNSTT 158
Query: 171 SFKPKWLSSSVHILDTSERCSNLVTSSILSIS 76
+ W SS+ +TS S+ SS++S++
Sbjct: 159 NSSISWNSSTSAATNTSSSSSSSSQSSVVSVN 190
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.1 bits (62), Expect = 0.62
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = -2
Query: 270 SENSAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNLVTSS 91
S +S+ S++++ S+ S+ S +S+ S S SSSV I ++ + +SS
Sbjct: 165 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSS 224
Query: 90 ILSISFTLKPSNLTNSNV*TKSHKTHI 10
S S + +PS+ ++S + T S T I
Sbjct: 225 SSSSSSSSRPSS-SSSFITTMSSSTFI 250
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 261 SAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSS 142
S + TN K+SN+GF+S +S + + S P LS S
Sbjct: 213 SISYPTNYGCKLSNLGFMSPQSPVKRELNDSTSPSKLSES 252
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -2
Query: 279 MKESENSAPFSTNATLKVS-NVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNL 103
M+ S + PF + K S + S K S KS + S+SVH ++ SN
Sbjct: 133 MQSSPSKDPFVSQDYEKESISSSQFSKKYSEGSLKSQQSNTR--SNSVHEKQNTDHASNA 190
Query: 102 VTSSILSISFTLKPSN 55
+SS + S +LKP+N
Sbjct: 191 SSSSSVVSSPSLKPNN 206
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 210 LSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNLVTSS 91
L A +SA LS W+S S H+ DT E ++L +S
Sbjct: 17 LPASGKTSSAMKLSRYLTWMSVSTHLYDTKEIDNSLSENS 56
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 27.1 bits (57), Expect = 2.5
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -2
Query: 378 FAKGFSLSVSAIFLINVDVFTGFMCCIIRSRFVMKESENSAPFSTNATLKVSNVGFLSAK 199
FA+G +SAI +++ F F + V K E A ++ N ++ + + K
Sbjct: 339 FAEG---EISAIVILDDGTFFSFS----NTELVWKREEALA-YAINPSILPTTLLTSYQK 390
Query: 198 SMMNSAKS-LSFKPKWLSSSVHILDTSERCSNLVTSSILSISFTLK 64
S+ + S +SF +W ++D + +SS+L +FT K
Sbjct: 391 SIQDEENSSVSFLNRWYRHFNQLIDFLKHPHGFTSSSVLDDAFTTK 436
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = -2
Query: 270 SENSAPFSTNATLKVSNVGFLSAKSMMNSAKSL----SFKPKWLSSSVHILDTSERCSNL 103
+ +S+ FS++ T S + S S +S S+ + P S S+ TS S+
Sbjct: 547 TSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSA 606
Query: 102 VTSSILSISFTLKPSN 55
TSS SIS ++ S+
Sbjct: 607 STSSPSSISSSISSSS 622
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 503 SSTDNVVDLAMAELEALAPSNSTTNELLIGKEPLKIESSR 622
++ DN ++ +EL A +N+TTN+ E +ESS+
Sbjct: 542 NTDDNEYSVSKSELYATGDTNNTTNQGYENSERKYVESSK 581
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.3
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -2
Query: 270 SENSAP-FSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNLVTS 94
S +S+P S+++TL S++ S S +S+ S S SSS +S S + +S
Sbjct: 217 SSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSS 276
Query: 93 SILSISFTLKPSNLTNSN 40
S S S T S +++S+
Sbjct: 277 SSSSSSPTSTSSTISSSS 294
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 71 VKLILKMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVE 250
+ + K+ E L +S ++++ ELD + +ND+ I ++ + + V+
Sbjct: 110 ISISKKLSENENLP-VSKIAEVTNELDTLVRINDQLSRNHISGTTEEMQSSSSLIAGEVQ 168
Query: 251 NGAEFSDSFMTNLLRIIQHMKPVNTSTLIKNIA-ETESEN 367
G F D L ++ P + I+ + E E E+
Sbjct: 169 PGISFRDQLKVGKLEDTLYLGPTTSEAFIERLQNELELES 208
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 3.3
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 86 KMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVAL-VENGAE 262
K+D+ K E + +SK L+ L +DK+ I L DK + K+ L V +
Sbjct: 1157 KVDKHGKAEAIEWLSKYIDRLNQSLEYDDKN-----ITLKDKLLLLQCLKMLLEVSDRKL 1211
Query: 263 FSDSFMTNLLRIIQHMKPVNTSTLIKNIAETE 358
+ LL + +P NT+T ++ + E
Sbjct: 1212 IVEKLRPILLPSFEIPEPCNTATSVQELINPE 1243
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = -2
Query: 291 SRFVMKESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERC 112
S + S +S+P S+++ ++ F+++ +S +S S SSS L +S
Sbjct: 53 SATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSA 112
Query: 111 SNLVTSSILSIS 76
S +SS ++S
Sbjct: 113 SPTSSSSSHALS 124
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 25.8 bits (54), Expect = 5.8
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +2
Query: 98 VTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSDSF 277
+TK E L V ++ NH G+ K ++ + A K+P F + N + ++
Sbjct: 278 LTKKERLYTVDRV--RRSNHSGIESKTFKKYQVIEALKDPVTWLFTFHVFCNQLSNNLAY 335
Query: 278 MTNLLRIIQHMKPVNTSTLI 337
NLL ++ +N STL+
Sbjct: 336 QQNLLFTSLNVSDLN-STLV 354
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 224 ETFKVALVENGAEFSDSFMTNLLRIIQHMKPVNTSTLIKNIAETESENPLAKK 382
E+ V + +N + F T + I QH KP+NT L K ++ L KK
Sbjct: 481 ESTLVVMTQN-EKLKRKFSTEIELIKQHTKPMNTCQLEKVPMYVKALTSLMKK 532
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,500,548
Number of Sequences: 5004
Number of extensions: 49850
Number of successful extensions: 177
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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