Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7i06
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 79 2e-15
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 79 2e-15
AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical ... 30 1.3
U88311-4|AAB42344.1| 537|Caenorhabditis elegans Udp-glucuronosy... 30 1.8
Z68014-6|CAA92029.1| 279|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF024503-3|AAG24098.3| 331|Caenorhabditis elegans Serpentine re... 28 7.1
U80027-22|AAC48112.1| 336|Caenorhabditis elegans Seven tm recep... 27 9.4
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF047655-11|AAC04405.1| 336|Caenorhabditis elegans Seven tm rec... 27 9.4
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 27 9.4
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +2
Query: 104 KLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGA--EFSDSF 277
+LEHLSLVSK+ +E++NH G+ +KD+AEF+I LA +NPTF+ K AL G +F DS
Sbjct: 3 QLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDDSL 62
Query: 278 MTNLLRIIQHMKPV 319
+LRI+Q M V
Sbjct: 63 TATILRIVQSMTAV 76
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +2
Query: 104 KLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGA--EFSDSF 277
+LEHLSLVSK+ +E++NH G+ +KD+AEF+I LA +NPTF+ K AL G +F DS
Sbjct: 3 QLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDDSL 62
Query: 278 MTNLLRIIQHMKPV 319
+LRI+Q M V
Sbjct: 63 TATILRIVQSMTAV 76
>AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical
protein F59B1.6 protein.
Length = 359
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -2
Query: 378 FAKGFSLSVSAIFLINVDVFTGFMCCIIRSRFVMKESENSAPFSTNA 238
F + L + IFL + VFT F+ I+R R V +++ N FST A
Sbjct: 98 FLSSYVLVIIWIFLFAITVFTMFIILILRLRGVTRKNSNFY-FSTTA 143
>U88311-4|AAB42344.1| 537|Caenorhabditis elegans
Udp-glucuronosyltransferase protein28 protein.
Length = 537
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 496 NFFCK*VFGCYSLFVFFIIT--TFIRKRLRFIIWYGQARKLF 377
N+F K F Y+LF F I+ T I +RFI Y +ARK F
Sbjct: 489 NYFQKTFFDIYALFALFYISVGTIIAISIRFI--YQKARKYF 528
>Z68014-6|CAA92029.1| 279|Caenorhabditis elegans Hypothetical
protein W04G3.7 protein.
Length = 279
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 159 KWLSSSVHILDTSERCSNLVTSSILSISFTL 67
++ SSSV I+ S RC+ L T LSI F L
Sbjct: 69 RFFSSSVFIMIVSSRCTFLFTMRKLSILFAL 99
>AF024503-3|AAG24098.3| 331|Caenorhabditis elegans Serpentine
receptor, class j protein6 protein.
Length = 331
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 523 NNIISRTWFNFFCK*VFGCYSLFVFFIITTFIRKRL 416
N ++ ++WF +F CY + V+ ++ I K++
Sbjct: 189 NFVVYKSWFGILSLTLFSCYCMSVYLVLGYKIMKKM 224
>U80027-22|AAC48112.1| 336|Caenorhabditis elegans Seven tm receptor
protein 64 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 511 SRTWFNFFCK*VFGCYSLFVFFIITTFIRKRLRFIIWYGQARKL 380
S+TW + GC++L ++FI FI RL +I +KL
Sbjct: 83 SKTWLRYMLAMWSGCHTLIIWFIAMQFI-YRLVCLIDTNNIKKL 125
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 473 KDLFTEEIKPSSTDNVVDLAMAELEALAPSNSTTNELLIGKEPLKIESSRNSDH 634
KD+ EEI+ D +++ AM +A T N G E +K E + +H
Sbjct: 90 KDVKVEEIEAEEHDELIETAMYLSDASEGGEITMNTEPPGFEEVKAEELKAEEH 143
>AF047655-11|AAC04405.1| 336|Caenorhabditis elegans Seven tm
receptor protein 63 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 511 SRTWFNFFCK*VFGCYSLFVFFIITTFIRKRLRFIIWYGQARKL 380
S+TW + GC++L ++FI FI RL +I +KL
Sbjct: 83 SKTWLRYMLAMWSGCHTLIIWFIAMQFI-YRLVCLIDTNNIKKL 125
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = -1
Query: 442 ITTFIRKRLRFIIWYGQARKLFCQRI 365
++ F+R RL++ + Y +A+K+ QR+
Sbjct: 43 LSLFLRNRLKYALNYTEAKKILTQRV 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,481,864
Number of Sequences: 27780
Number of extensions: 268237
Number of successful extensions: 769
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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