Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7h18
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.9  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 375 RSWPARPSG 401
           R+WP RPSG
Sbjct: 282 RTWPFRPSG 290


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 370 PAQFQHVAGGHRAGHSPDGCFAPSPVESGQKSSPLFLSEW 251
           PA +   A  H A    +G F       G  S P+F + W
Sbjct: 27  PAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRW 66


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 460 QIPADVALFGCSRRPALVSPPLGLAGQL 377
           QIPA V       RP +V P + + GQ+
Sbjct: 337 QIPAPVYYGNFPPRPIMVRPWVPMRGQV 364


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 560 TGPACTTSRPWTPRG 516
           TGPA  T + W  RG
Sbjct: 506 TGPAFLTIKEWIERG 520


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,525
Number of Sequences: 438
Number of extensions: 4192
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)