Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7h16
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens ... 38 0.027
X15265-1|CAA33336.1| 479|Homo sapiens muscarinic acetylcholine ... 30 5.4
M16405-1|AAA51571.2| 479|Homo sapiens muscarinic acetylcholine ... 30 5.4
BC119817-1|AAI19818.1| 478|Homo sapiens CHRM4 protein protein. 30 5.4
BC119775-1|AAI19776.1| 478|Homo sapiens CHRM4 protein protein. 30 5.4
BC095546-1|AAH95546.1| 479|Homo sapiens CHRM4 protein protein. 30 5.4
AF498918-1|AAM18941.1| 479|Homo sapiens muscarinic acetylcholin... 30 5.4
AF385590-1|AAK68115.1| 474|Homo sapiens m4 muscarinic cholinerg... 30 5.4
DQ523893-1|ABI35405.1| 99|Homo sapiens immunoglobulin heavy ch... 29 9.4
BC107110-1|AAI07111.1| 176|Homo sapiens TMEM95 protein protein. 29 9.4
>AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ16275 fis, clone NT2RI2027157, moderately
similar to Mouse SDR2 mRNA. ).
Length = 626
Score = 37.5 bits (83), Expect = 0.027
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +3
Query: 75 QVTIEGAETFKGFFLQARSID--TDQWIGTWENAPN------TTIHPECSSITHADPKEK 230
+VT+ G FKGF L+AR+ + IG++ + T + S+++H +K
Sbjct: 65 EVTLSG-HPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKK 123
Query: 231 LRAVLLWRAPPDAQGRVYFTGTVLKNYSTFW 323
+ W AP A F TV++ Y +W
Sbjct: 124 TEIKVYWNAPSSAPNHTQFLVTVVEKYKIYW 154
>X15265-1|CAA33336.1| 479|Homo sapiens muscarinic acetylcholine
receptor M4 protein.
Length = 479
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 425 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 469
>M16405-1|AAA51571.2| 479|Homo sapiens muscarinic acetylcholine
receptor m4 protein.
Length = 479
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 425 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 469
>BC119817-1|AAI19818.1| 478|Homo sapiens CHRM4 protein protein.
Length = 478
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 424 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 468
>BC119775-1|AAI19776.1| 478|Homo sapiens CHRM4 protein protein.
Length = 478
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 424 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 468
>BC095546-1|AAH95546.1| 479|Homo sapiens CHRM4 protein protein.
Length = 479
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 425 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 469
>AF498918-1|AAM18941.1| 479|Homo sapiens muscarinic acetylcholine
receptor M4 protein.
Length = 479
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 425 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 469
>AF385590-1|AAK68115.1| 474|Homo sapiens m4 muscarinic cholinergic
receptor protein.
Length = 474
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 114 FLQARSIDTDQWIGTWENAPNTTIHPECSSITHADPKEKLRAVLL 248
F Q+ DT IG W N+TI+P C ++ +A K+ R +LL
Sbjct: 425 FCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLL 469
>DQ523893-1|ABI35405.1| 99|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 99
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 144 QWIGTWENAPNTTIHPECSS-ITHADPKEKLRAVLLWRAPPDAQGRVYFTGTVLKNYSTF 320
+WIG+ + +T +P S +T + K + L + A VY+ T+ + Y F
Sbjct: 20 EWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCATIFQGYYDF 79
Query: 321 WS 326
WS
Sbjct: 80 WS 81
>BC107110-1|AAI07111.1| 176|Homo sapiens TMEM95 protein protein.
Length = 176
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 257 CPPQQNGSQFLFRVSMSDGRTFRMYRRIRCVFPGADPL 144
CPP GS L+ S G + R RC FPG+ L
Sbjct: 105 CPPACRGSTTLYNCSTCKGTEVSCWPRKRC-FPGSQDL 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,695,457
Number of Sequences: 237096
Number of extensions: 1645310
Number of successful extensions: 4946
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4946
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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