Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7h08
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical pr...    31   0.64 
AF022971-12|AAG23974.3|  229|Caenorhabditis elegans Hypothetical...    30   2.0  
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    28   6.0  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    28   6.0  
AC024877-7|AAF60907.3|  438|Caenorhabditis elegans Hypothetical ...    28   6.0  
U97009-8|AAC69032.1|  534|Caenorhabditis elegans Udp-glucuronosy...    28   7.9  

>Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical
           protein ZK829.10 protein.
          Length = 669

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 510 YYVIYYLRIILKILVSPMGYSYYIILLFWAVLYKCAKFQLYNVS 379
           +Y +    I+  ++VSP G++YY  L  W    K  K + +N S
Sbjct: 524 FYDLIQFFILFFVIVSPFGFAYYSYLKMWHHFEKFEKEKQFNSS 567


>AF022971-12|AAG23974.3|  229|Caenorhabditis elegans Hypothetical
           protein C31B8.1 protein.
          Length = 229

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +2

Query: 497 YIT*YVFLWFLSCKHNLSTF--TV*SCI 574
           Y+T Y FLW L+ K NL  F  T+ +CI
Sbjct: 70  YLTAYPFLWMLTSKRNLQGFFMTIIACI 97


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical protein
            C44B9.4 protein.
          Length = 1150

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 274  IAPVIVPCRCMRHCFLSVSRQTVGGFMFGC 185
            I P  + CRC +H  L +SRQ   G +  C
Sbjct: 1098 IIPPHIKCRCQKHSDLQISRQESTGELVRC 1127


>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
           protein W08D2.5 protein.
          Length = 1256

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 15  IKMENDLDKVVEEIMSMPNVNGCLIADPQGLCLASKGAAHVDSA--GIIVAISEQACKIQ 188
           +  + DL K +    S+  +NG L  DP  L L  K    ++    G I   +++   +Q
Sbjct: 517 LPFDGDLVKAIATCHSLTRINGVLHGDPLDLILFQKTGWTMEEGIEGDIEEETQRFDNVQ 576

Query: 189 PNMKPPT 209
           P++  PT
Sbjct: 577 PSIIKPT 583


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 447 YYIILLFWAVLYKCAKFQLYNVSRWVEIMFKDSNAYRQSRIVQC 316
           YY+IL+ W VLY    F + N+ R  +  +  +N Y  S   +C
Sbjct: 204 YYMILISWIVLYIINIFYVNNMGR-CDNPWNQNNCYDGSEQSRC 246


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = -3

Query: 238  HCFLSVSRQTVGGFMFGCILQACSDMATIIPAESTCAAPFDAKHSPCGSAIRQP 77
            HC   VSR+T   F F C    C     +   ++ C    D   S C SA   P
Sbjct: 3950 HCE-DVSRRTCSPFEFECANSVCIPRKFMCDGDNDCGDNSDETSSECRSAQCDP 4002


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = -3

Query: 238  HCFLSVSRQTVGGFMFGCILQACSDMATIIPAESTCAAPFDAKHSPCGSAIRQP 77
            HC   VSR+T   F F C    C     +   ++ C    D   S C SA   P
Sbjct: 3950 HCE-DVSRRTCSPFEFECANSVCIPRKFMCDGDNDCGDNSDETSSECRSAQCDP 4002


>AC024877-7|AAF60907.3|  438|Caenorhabditis elegans Hypothetical
           protein Y95B8A.11 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 304 LFYFYVFNLKIAPVIVPCRCMRHCFLSVSRQTVGGF 197
           +FYF   +L +  ++  C C+RH  LS + + VG F
Sbjct: 279 VFYFVSLDLNLQKILKKCVCLRHLTLS-NVEDVGVF 313


>U97009-8|AAC69032.1|  534|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein12 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 498 YYLRIILKILVSPMGYSYYIILLFWAVLYKC 406
           YYL ++L +LVS +  +Y  I L   VL KC
Sbjct: 496 YYLDVLLFLLVSSIVITYLAISLLKKVLGKC 526


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,315,030
Number of Sequences: 27780
Number of extensions: 304941
Number of successful extensions: 654
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)