Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7h03
         (522 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55777-2|CAA39297.1|  196|Homo sapiens protein ( H.sapiens Mahla...    29   7.5  
BC101934-1|AAI01935.1|  760|Homo sapiens SIX4 protein protein.         29   9.9  
BC099722-1|AAH99722.1|  760|Homo sapiens SIX4 protein protein.         29   9.9  
BC098282-1|AAH98282.1|  760|Homo sapiens SIX4 protein protein.         29   9.9  
BC098135-1|AAH98135.1|  760|Homo sapiens SIX4 protein protein.         29   9.9  
AB024687-1|BAA86223.1|  760|Homo sapiens SIX4 protein.                 29   9.9  

>X55777-2|CAA39297.1|  196|Homo sapiens protein ( H.sapiens Mahlavu
           hepatocellular carcinoma hhc(M) DNA. ).
          Length = 196

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 276 NTTINTVHIRNTTKKTNGEISGG 344
           N T N  H+RN TKK+N  I GG
Sbjct: 79  NKTKNEQHLRNNTKKSNSCIIGG 101


>BC101934-1|AAI01935.1|  760|Homo sapiens SIX4 protein protein.
          Length = 760

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = -2

Query: 485 FTTKVRFNYFYIVQISGLSTAPGILQGLFEKSTSFGLFQ*EPI*MAMSTRNFSVS 321
           FTT V+ N + IVQI         L G    S  F   Q  P+ +A S  N SVS
Sbjct: 451 FTTPVQINQYGIVQIPNSGANSQFLNG----SIGFSPLQLPPVSVAASQGNISVS 501


>BC099722-1|AAH99722.1|  760|Homo sapiens SIX4 protein protein.
          Length = 760

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = -2

Query: 485 FTTKVRFNYFYIVQISGLSTAPGILQGLFEKSTSFGLFQ*EPI*MAMSTRNFSVS 321
           FTT V+ N + IVQI         L G    S  F   Q  P+ +A S  N SVS
Sbjct: 451 FTTPVQINQYGIVQIPNSGANSQFLNG----SIGFSPLQLPPVSVAASQGNISVS 501


>BC098282-1|AAH98282.1|  760|Homo sapiens SIX4 protein protein.
          Length = 760

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = -2

Query: 485 FTTKVRFNYFYIVQISGLSTAPGILQGLFEKSTSFGLFQ*EPI*MAMSTRNFSVS 321
           FTT V+ N + IVQI         L G    S  F   Q  P+ +A S  N SVS
Sbjct: 451 FTTPVQINQYGIVQIPNSGANSQFLNG----SIGFSPLQLPPVSVAASQGNISVS 501


>BC098135-1|AAH98135.1|  760|Homo sapiens SIX4 protein protein.
          Length = 760

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = -2

Query: 485 FTTKVRFNYFYIVQISGLSTAPGILQGLFEKSTSFGLFQ*EPI*MAMSTRNFSVS 321
           FTT V+ N + IVQI         L G    S  F   Q  P+ +A S  N SVS
Sbjct: 451 FTTPVQINQYGIVQIPNSGANSQFLNG----SIGFSPLQLPPVSVAASQGNISVS 501


>AB024687-1|BAA86223.1|  760|Homo sapiens SIX4 protein.
          Length = 760

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = -2

Query: 485 FTTKVRFNYFYIVQISGLSTAPGILQGLFEKSTSFGLFQ*EPI*MAMSTRNFSVS 321
           FTT V+ N + IVQI         L G    S  F   Q  P+ +A S  N SVS
Sbjct: 451 FTTPVQINQYGIVQIPNSGANSQFLNG----SIGFSPLQLPPVSVAASQGNISVS 501


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,902,032
Number of Sequences: 237096
Number of extensions: 1596045
Number of successful extensions: 3077
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3077
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)