Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7g16
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   4.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   7.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 272 NP*ALIARTKKCHVPPEPECASETADQAIERH 177
           NP A +  T K  V   P    E  D ++ER+
Sbjct: 693 NPAAEVRYTAKLQVKVPPRWIVEPTDVSVERN 724


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +2

Query: 119 ALTSRVNRDKCVTSNA*ANRAFLSLDPRSRSHTQVRAERDTFSCV 253
           A + R  R +CVT++   +R     +P S S           SC+
Sbjct: 251 AKSIRARRTECVTNSVTCDRPSDEAEPSSTSKKSGIVRSHQQSCI 295


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 237 TLFRACNQCSWICK 278
           T+F     C WIC+
Sbjct: 227 TIFVPVKPCPWICE 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,277
Number of Sequences: 438
Number of extensions: 2138
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)