Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7g14
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 34 0.40
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 34 0.40
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 34 0.40
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 34 0.40
AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein. 34 0.40
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 34 0.40
AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein. 33 0.52
BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag dom... 33 0.92
BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein. 33 0.92
BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly pro... 33 0.92
AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein. 33 0.92
BC104836-1|AAI04837.1| 570|Homo sapiens C14orf174 protein protein. 31 2.8
BC104834-1|AAI04835.1| 570|Homo sapiens C14orf174 protein protein. 31 2.8
AC007954-6|AAF62561.1| 674|Homo sapiens unknown protein. 31 2.8
BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain cont... 31 3.7
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein. 31 3.7
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 30 4.9
D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly prote... 30 4.9
AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly pro... 30 4.9
AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly pro... 30 4.9
U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independe... 30 6.5
U41806-1|AAA93299.1| 440|Homo sapiens p60 protein. 30 6.5
BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein. 30 6.5
BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein. 30 6.5
BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein. 30 6.5
BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein. 30 6.5
BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome... 30 6.5
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 29 8.5
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 29 8.5
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 29 8.5
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3
protein.
Length = 711
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 386 MVENVKHVIADQEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 445
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + P S+PQ
Sbjct: 446 LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQ 477
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 259 MVENVKHVIADQEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 318
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + P S+PQ
Sbjct: 319 LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQ 350
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome
associated protein protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 392 MVENVKHVIADQEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 451
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + P S+PQ
Sbjct: 452 LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQ 483
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome
associated protein variant protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 392 MVENVKHVIADQEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 451
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + P S+PQ
Sbjct: 452 LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQ 483
>AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 392 MVENVKHVIAEEEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 451
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + P S+PQ
Sbjct: 452 LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQ 483
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 392 MVENVKHVIADQEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 451
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + P S+PQ
Sbjct: 452 LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQ 483
>AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein.
Length = 2450
Score = 33.5 bits (73), Expect = 0.52
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 127 STDPASSDSGVSCTRRPECYESKSIVDPKTITKSCSSVAGAFE 255
+TDP + D VS T Y KS+ K +TK+ VAG E
Sbjct: 971 ATDPVTGDLYVSDTNTRRIYRPKSLTGAKDLTKNAEVVAGTGE 1013
>BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag domain
containing 4 protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.92
Identities = 21/93 (22%), Positives = 35/93 (37%)
Frame = +2
Query: 278 HVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKN 457
H H + M+ + E + E+ + + E E+M EEE+ KN
Sbjct: 355 HRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKN 414
Query: 458 EQTALESDNKENSLDCEPVPKSAPNSRPQTPKT 556
E+ D ++ D P+ P P T +T
Sbjct: 415 EEEGESKDEEDEDEDGGQKPEGEPQQDPGTEET 447
>BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.92
Identities = 21/93 (22%), Positives = 35/93 (37%)
Frame = +2
Query: 278 HVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKN 457
H H + M+ + E + E+ + + E E+M EEE+ KN
Sbjct: 355 HRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKN 414
Query: 458 EQTALESDNKENSLDCEPVPKSAPNSRPQTPKT 556
E+ D ++ D P+ P P T +T
Sbjct: 415 EEEGESKDEEDEDEDGGQKPEGEPQQDPGTEET 447
>BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 32.7 bits (71), Expect = 0.92
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 296 ESISDMKVQNECYIE--PIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTA 469
E SD +VQ+ E P++ E + + E+ E + + + +EE E+ E T
Sbjct: 170 EFSSDEEVQDNTPSEMPPLEGEEEENPKENPEVKAEEKEVPKEIPEVKDEEKEVAKEITE 229
Query: 470 LESDNKENSLDC---EPVPKSAPNSRPQ 544
++++ K +S DC P K P PQ
Sbjct: 230 VKAEEKADSKDCMEATPEVKEDPKEVPQ 257
>AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein.
Length = 689
Score = 32.7 bits (71), Expect = 0.92
Identities = 21/93 (22%), Positives = 35/93 (37%)
Frame = +2
Query: 278 HVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKN 457
H H + M+ + E + E+ + + E E+M EEE+ KN
Sbjct: 475 HRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKN 534
Query: 458 EQTALESDNKENSLDCEPVPKSAPNSRPQTPKT 556
E+ D ++ D P+ P P T +T
Sbjct: 535 EEEGESKDEEDEDEDGGQKPEGEPQQDPGTEET 567
>BC104836-1|AAI04837.1| 570|Homo sapiens C14orf174 protein protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 362 RSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRP 541
+ST E++P+ E +E EEE NE+T LE E + KS P
Sbjct: 319 KSTDENVPEPLEEIKLEF-----PEEESRKTNEETILEQSEMMKPESPEEIRKSNEKKNP 373
Query: 542 QTPK 553
Q P+
Sbjct: 374 QPPE 377
>BC104834-1|AAI04835.1| 570|Homo sapiens C14orf174 protein protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 362 RSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRP 541
+ST E++P+ E +E EEE NE+T LE E + KS P
Sbjct: 319 KSTDENVPEPLEEIKLEF-----PEEESRKTNEETILEQSEMMKPESPEEIRKSNEKKNP 373
Query: 542 QTPK 553
Q P+
Sbjct: 374 QPPE 377
>AC007954-6|AAF62561.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 362 RSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLDCEPVPKSAPNSRP 541
+ST E++P+ E +E EEE NE+T LE E + KS P
Sbjct: 319 KSTDENVPEPLEEIKLEF-----PEEESRKTNEETILEQSEMMKPESPEEIRKSNEKKNP 373
Query: 542 QTPK 553
Q P+
Sbjct: 374 QPPE 377
>BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain
containing 136 protein.
Length = 1154
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +2
Query: 323 NECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLD 502
+E EP PE +ST + + E E+ +SEEE + + ++LES + N L
Sbjct: 1060 DELVAEPADPEEAKSTEDQ--EENEEDKEEEEKEEDSEEEED--DADSSLESPEENNPLR 1115
Query: 503 CEPVPKSAPNSRP 541
KS+P P
Sbjct: 1116 LSESKKSSPTPNP 1128
>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
Length = 1270
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +2
Query: 323 NECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKENSLD 502
+E EP PE +ST + + E E+ +SEEE + + ++LES + N L
Sbjct: 1176 DELVAEPADPEEAKSTEDQ--EENEEDKEEEEKEEDSEEEED--DADSSLESPEENNPLR 1231
Query: 503 CEPVPKSAPNSRP 541
KS+P P
Sbjct: 1232 LSESKKSSPTPNP 1244
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/92 (23%), Positives = 37/92 (40%)
Frame = +2
Query: 269 ITEHVTHKIESISDMKVQNECYIEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEME 448
+ E+V H I M+ +EP + E + M E + ++ E
Sbjct: 391 MVENVKHVIADQEVMETNRVESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSA 450
Query: 449 LKNEQTALESDNKENSLDCEPVPKSAPNSRPQ 544
L E+ + E + KE+ EPV + S+PQ
Sbjct: 451 LDMEKESDEKEEKESEPQPEPVAQPQAQSQPQ 482
>D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly protein
protein.
Length = 506
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 296 ESISDMKVQNECYIE--PIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTA 469
E SD +VQ+ E P++ E + + E+ E + + + +EE E+ E
Sbjct: 170 EFSSDEEVQDNTPSEMPPLEGEEEENPKENPEVKAEEKEVPKEIPEVKDEEKEVAKEIPE 229
Query: 470 LESDNKENSLDC---EPVPKSAPNSRPQ 544
++++ K +S DC P K P PQ
Sbjct: 230 VKAEEKADSKDCMEATPEVKEDPKEVPQ 257
>AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 296 ESISDMKVQNECYIE--PIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTA 469
E SD +VQ+ E P++ E + + E+ E + + + +EE E+ E
Sbjct: 170 EFSSDEEVQDNTPSEMPPLEGEEEENPKENPEVKAEEKEVPKEIPEVKDEEKEVPKEIPE 229
Query: 470 LESDNKENSLDC---EPVPKSAPNSRPQ 544
++++ K +S DC P K P PQ
Sbjct: 230 VKAEEKADSKDCMEATPEVKEDPKEVPQ 257
>AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 variant protein.
Length = 506
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 296 ESISDMKVQNECYIE--PIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTA 469
E SD +VQ+ E P++ E + + E+ E + + + +EE E+ E
Sbjct: 170 EFSSDEEVQDNTPSEMPPLEGEEEENPKENPEVKAEEKEVPKEIPEVKDEEKEVAKEIPE 229
Query: 470 LESDNKENSLDC---EPVPKSAPNSRPQ 544
++++ K +S DC P K P PQ
Sbjct: 230 VKAEEKADSKDCMEATPEVKEDPKEVPQ 257
>U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independent
ligand for the Lck SH2 domain p62 protein.
Length = 440
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 252 GIEVDIDVEHGGKRSRLTPVSPESSSTE 279
>U41806-1|AAA93299.1| 440|Homo sapiens p60 protein.
Length = 440
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 252 GIEVDIDVEHGGKRSRLTPVSPESSSTE 279
>BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 252 GIEVDIDVEHGGKRSRLTPVSPESSSTE 279
>BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 252 GIEVDIDVEHGGKRSRLTPVSPESSSTE 279
>BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 252 GIEVDIDVEHGGKRSRLTPVSPESSSTE 279
>BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein.
Length = 356
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 168 GIEVDIDVEHGGKRSRLTPVSPESSSTE 195
>BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome 1
protein.
Length = 368
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 209 GSTIDFDS*HSGRRVQLTPLSDEAGSVD 126
G +D D H G+R +LTP+S E+ S +
Sbjct: 180 GIEVDIDVEHGGKRSRLTPVSPESSSTE 207
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 335 IEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKE 490
++ ++ L + E HTE +++ ++ N EE+ + + +Q +LES+ E
Sbjct: 1266 VQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELME 1317
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 335 IEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKE 490
++ ++ L + E HTE +++ ++ N EE+ + + +Q +LES+ E
Sbjct: 1266 VQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELME 1317
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 335 IEPIQPELDRSTTESMPQHTESFVIEQMVTVNSEEEMELKNEQTALESDNKE 490
++ ++ L + E HTE +++ ++ N EE+ + + +Q +LES+ E
Sbjct: 1266 VQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELME 1317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,176,627
Number of Sequences: 237096
Number of extensions: 1429152
Number of successful extensions: 4263
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4258
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -