Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7g07
         (338 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    38   2e-05
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.1  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 38.3 bits (85), Expect = 2e-05
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 204 YDQKPQNFYSNGIISLPTRWQKVIEKN 284
           +  K Q FY  GI+ LP RWQKVI++N
Sbjct: 310 FANKNQKFYERGIMMLPERWQKVIDQN 336


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 210  QKPQNFYSNGII 245
            Q P N +SNGII
Sbjct: 1133 QPPPNTHSNGII 1144


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 210  QKPQNFYSNGII 245
            Q P N +SNGII
Sbjct: 1129 QPPPNTHSNGII 1140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,437
Number of Sequences: 438
Number of extensions: 2093
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)