Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7g01
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.87 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.1  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   8.1  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   8.1  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 170 EASSTSGNLTDSSTQTETYVTLPYNGSVNDASLSFSKDFNI 292
           E  +   N+T+SS  TETY    YN +  D++   +  F I
Sbjct: 2   EIGNNETNITNSSI-TETYFVSAYNLNQEDSNWIITNSFII 41


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 236 VALHMFLFVSNYPSSSQKLNLLRHRARY 153
           + LH   F+  Y SS ++LN   HR R+
Sbjct: 65  ILLHAKDFLEQYFSSIRRLNSEAHRIRW 92


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 175 CFVTEHDTYERRRIVVF 125
           C+ T H T+ R R+ VF
Sbjct: 164 CYFTAHVTHPRHRLCVF 180


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 294 FILKSLLNDKLASLTLPLYGSVT 226
           F L S+      S  +PLYG +T
Sbjct: 622 FFLSSMDESNTKSYEIPLYGKMT 644


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 294 FILKSLLNDKLASLTLPLYGSVT 226
           F L S+      S  +PLYG +T
Sbjct: 622 FFLSSMDESNTKSYEIPLYGKMT 644


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 104 SLHEICKENNDTP 142
           +L ++C + NDTP
Sbjct: 38  NLRKVCSKKNDTP 50


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 104 SLHEICKENNDTP 142
           +L ++C + NDTP
Sbjct: 12  NLRKVCSKKNDTP 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,993
Number of Sequences: 438
Number of extensions: 3272
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)