BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7f24
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1668 + 38998348-38998434,38999234-38999300,38999377-389994... 50 1e-06
05_04_0036 + 17386160-17386318,17386588-17386651,17387089-173871... 47 1e-05
01_06_1111 - 34599014-34599215,34599378-34599497,34599654-345997... 44 1e-04
05_04_0038 + 17403620-17403769,17403975-17404038,17404807-174048... 43 2e-04
04_04_0496 + 25631832-25631972,25632094-25632160,25634993-256350... 43 2e-04
09_04_0586 - 18736643-18736914,18737085-18737187,18737279-187379... 41 7e-04
10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844... 40 0.001
07_03_1537 + 27562097-27562340,27562436-27562494,27562605-275626... 40 0.002
11_01_0536 + 4243306-4243449,4243790-4243856,4243996-4244054,424... 39 0.003
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462... 39 0.003
01_06_1110 - 34582267-34582468,34582732-34582819,34589337-345894... 39 0.003
08_02_1201 - 25243516-25243681,25243784-25243892,25244046-252441... 39 0.004
09_04_0703 - 19614057-19614264,19615305-19615407,19615880-196159... 38 0.005
05_04_0043 + 17450999-17451181,17451353-17451416,17451642-174517... 38 0.005
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 38 0.005
01_05_0061 + 17752382-17752652,17753521-17753579,17753919-17753936 38 0.005
06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813... 38 0.009
03_05_0832 - 28037047-28037315,28037428-28037530,28037664-280376... 36 0.020
12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 34 0.080
05_04_0039 + 17421826-17421966,17422105-17422168,17422562-174226... 33 0.18
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 33 0.24
12_01_0596 + 4867388-4867405,4869095-4869151,4869624-4869701,487... 30 1.7
09_04_0524 + 18321110-18323978,18324098-18324576 28 6.9
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 27 9.2
05_05_0209 - 23282848-23284110 27 9.2
04_04_0222 - 23717106-23717162,23717527-23717670 27 9.2
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 27 9.2
02_01_0358 - 2575858-2576796 27 9.2
>01_06_1668 +
38998348-38998434,38999234-38999300,38999377-38999435,
38999636-38999711,38999856-38999930,39000007-39000094,
39000261-39000486,39000689-39000804,39001172-39001383,
39001882-39001916,39002005-39002107,39002645-39002753,
39002838-39003036
Length = 483
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FPDGF FGVAT+++QIEGA GK +N+W F
Sbjct: 15 FPDGFVFGVATSAYQIEGARREGGKGDNIWDVF 47
>05_04_0036 +
17386160-17386318,17386588-17386651,17387089-17387147,
17387268-17387343,17387521-17387592,17387786-17387873,
17387992-17388250,17388446-17388561,17388876-17389096,
17389196-17389224,17389285-17389420,17389567-17389651,
17389735-17389963
Length = 530
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 460 WLTTLSILAVCHTGLAAYTK--FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
WL L +L V +T+ FPDGFTFG TA+ Q EGA G++ ++W ++
Sbjct: 17 WLLLLLLLVVQGVRSLQFTRDDFPDGFTFGAGTAAFQYEGAAAEDGRTPSIWDTY 71
>01_06_1111 -
34599014-34599215,34599378-34599497,34599654-34599760,
34600452-34600480,34600768-34600982,34601215-34601330,
34601960-34602218,34602342-34602429,34602932-34603003,
34603080-34603155,34603579-34603637,34603937-34604000,
34604104-34604232
Length = 511
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 457 AWLTTLSILAVCHTGLAAYTK--FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
A+ L ++V H L YT+ FP F FG AT+++Q EGA G+ ++W +F
Sbjct: 6 AFFCALLFISVQHGVLGGYTRNDFPADFVFGAATSAYQYEGAAAEDGRGASIWDTF 61
>05_04_0038 +
17403620-17403769,17403975-17404038,17404807-17404865,
17404981-17405056,17405196-17405267,17405411-17405498,
17405617-17405872,17405972-17406087,17406757-17406977,
17407074-17407102,17407192-17407291,17407405-17407492,
17407640-17407874
Length = 517
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1
Query: 457 AWLTTLSILAVCHTGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
AWL L + V FPDGF FG TA++Q EGA G++ ++W ++
Sbjct: 16 AWLLLLLLQGVSSLQFRR-EDFPDGFAFGAGTAAYQYEGAAAEDGRTPSIWDTY 68
>04_04_0496 +
25631832-25631972,25632094-25632160,25634993-25635054,
25636173-25636248,25636355-25636429,25637768-25637825,
25637955-25638207,25639030-25639037,25639159-25639411,
25639503-25639605,25639750-25639852,25639947-25640160
Length = 470
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 433 SAVRDDTMAWLTTLSILAVCHTGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVWG 612
+A R + + L++LA GL FP GF FG AT+++QIEGA+ K N W
Sbjct: 5 AATRIAVVVVVLALAVLAPAARGLRR-DDFPPGFLFGAATSAYQIEGAYLDDNKGLNNWD 63
Query: 613 SF 618
F
Sbjct: 64 VF 65
>09_04_0586 -
18736643-18736914,18737085-18737187,18737279-18737900,
18738376-18738463,18738537-18738614,18738741-18738816,
18738912-18738970,18739061-18739127,18739268-18739405
Length = 500
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 463 LTTLSILAV-CHTGLAAYTK--FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
L TL + A+ C+ A +T+ FP F FG +A++Q EGA+ GK +VW +F
Sbjct: 10 LFTLFLGALFCNGVYAKFTRYSFPKDFIFGTGSAAYQYEGAYKEGGKGPSVWDNF 64
>10_05_0036 +
8443957-8444112,8446063-8446129,8446685-8446743,
8446855-8446930,8447118-8447189,8447326-8447413,
8447489-8447744,8447934-8448049,8448247-8448470,
8448685-8448716,8448882-8449018,8449200-8449289,
8449383-8449557
Length = 515
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 496 TGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
TG FP+GF FG A++++Q EGA G+ +W F
Sbjct: 30 TGGLTRKSFPNGFVFGTASSAYQYEGAVKEDGRGPTIWDKF 70
>07_03_1537 +
27562097-27562340,27562436-27562494,27562605-27562680,
27562776-27562847,27562934-27563021,27563118-27563361,
27563490-27563605,27563783-27564000,27564113-27564144,
27564262-27564364,27564471-27564751
Length = 510
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FP+GF FG A +++Q+EG G+ ++W +F
Sbjct: 45 FPEGFVFGTAASAYQVEGMAKQGGRGPSIWDAF 77
>11_01_0536 +
4243306-4243449,4243790-4243856,4243996-4244054,
4244157-4244314,4244742-4244990,4245079-4245451,
4245580-4245702
Length = 390
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 487 VCHTGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
V + + Y+ FP F FG +A++Q EGA+ GK ++W +F
Sbjct: 24 VAYAKFSRYS-FPKDFIFGTGSAAYQYEGAYKEGGKGPSIWDTF 66
>03_05_0833 -
28045442-28045881,28045961-28046063,28046172-28046203,
28046299-28046516,28046606-28046721,28047757-28048000,
28048423-28048510,28048596-28048667,28048758-28048869,
28049047-28049115,28049627-28049685,28050067-28050325
Length = 603
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 496 TGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
TG + FP GF FG AT++ Q+EG G+ ++W F
Sbjct: 42 TGGLSRAAFPKGFVFGTATSAFQVEGMAASGGRGPSIWDPF 82
>01_06_1110 -
34582267-34582468,34582732-34582819,34589337-34589439,
34589886-34589914,34590114-34590144,34590621-34590822,
34591424-34591539,34591784-34592006,34592151-34592238,
34592336-34592407,34592485-34592560,34593822-34593880,
34595341-34595404,34595487-34595618
Length = 494
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 499 GLAAYTK--FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
G YT+ FP F FG AT+++Q +GA G+S +W +F
Sbjct: 21 GAVGYTRSDFPRDFVFGAATSAYQYDGAAAEDGRSPTIWDTF 62
>08_02_1201 -
25243516-25243681,25243784-25243892,25244046-25244148,
25244273-25244304,25244405-25244625,25244948-25245063,
25245149-25245404,25245916-25246003,25246133-25246210,
25246541-25246659,25246893-25246942,25247117-25247245
Length = 488
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 454 MAWLT-TLSILAVCHTGLAAYT-----KFPDGFTFGVATASHQIEGAWNVSGKSENVW 609
M WL L ++A+ G A + FP+ F FG +A++Q EGA N G+ ++W
Sbjct: 1 MRWLLLALFLVALVSNGAAVHGAFNRFSFPEDFIFGTGSAAYQYEGAVNEGGRGPSIW 58
>09_04_0703 -
19614057-19614264,19615305-19615407,19615880-19615973,
19616216-19616229,19616384-19616595,19617653-19617940,
19618275-19618362,19618444-19618515,19618597-19618672,
19618755-19618813,19618953-19619016,19619253-19619402
Length = 475
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FP+GF FG +++ Q+EGA G+ ++W +F
Sbjct: 36 FPEGFVFGAGSSAFQVEGAAAEDGRKPSIWDTF 68
>05_04_0043 +
17450999-17451181,17451353-17451416,17451642-17451700,
17452331-17452406,17452469-17452597,17453524-17453611,
17453711-17453966,17454308-17454423,17454569-17454789,
17454977-17455005,17455167-17455273,17455778-17456015
Length = 521
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FP F FG T+++Q EGA + G+S ++W +F
Sbjct: 47 FPGEFVFGAGTSAYQYEGATDEDGRSPSIWDTF 79
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 511 YTK--FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
YT+ FP+ F FG AT+S+Q EG ++ G+S + W F
Sbjct: 27 YTRGDFPEDFVFGSATSSYQYEGGFDEDGRSPSNWDIF 64
>01_05_0061 + 17752382-17752652,17753521-17753579,17753919-17753936
Length = 115
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 496 TGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
TG + FP GF FG A +++Q+EG G+ ++W +F
Sbjct: 46 TGGLSRRSFPAGFVFGTAASAYQVEGMALKDGRGPSIWDAF 86
>06_02_0148 -
12280794-12280962,12281102-12281210,12281283-12281385,
12281587-12281618,12281709-12281926,12282035-12282150,
12282428-12282683,12282912-12282999,12283393-12283468,
12283562-12283620,12285236-12285305,12285399-12285539
Length = 478
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 514 TKFPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
++FP+ F FG A++++Q EGA G+ ++W +F
Sbjct: 31 SQFPEDFFFGTASSAYQYEGAVREGGRGPSIWDTF 65
>03_05_0832 -
28037047-28037315,28037428-28037530,28037664-28037695,
28037788-28038005,28038145-28038260,28038514-28038757,
28039129-28039216,28039513-28039588,28040126-28040164,
28040347-28040405,28041292-28041529
Length = 493
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FP F FG AT+++Q+EG G+ ++W +F
Sbjct: 43 FPKRFVFGTATSAYQVEGMAASGGRGPSIWDAF 75
>12_02_0067 +
13144002-13144203,13144471-13144529,13144638-13144713,
13144802-13144873,13144969-13145056,13145365-13145601,
13145705-13145910,13145946-13146122,13146220-13146251,
13146330-13146432,13146547-13146815,13148029-13148175,
13148272-13148412,13148509-13148595,13148841-13148931,
13149093-13149192,13149292-13149352,13149442-13149663,
13149756-13149872,13149972-13150061,13150168-13150344
Length = 917
Score = 34.3 bits (75), Expect = 0.080
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FP GF FG A++++Q+EG G+ +W +F
Sbjct: 31 FPAGFVFGTASSAYQVEGNALQYGRGPCIWDTF 63
>05_04_0039 +
17421826-17421966,17422105-17422168,17422562-17422620,
17423410-17423536,17425029-17425116,17425196-17425451,
17425565-17425680,17426232-17426328,17426636-17426771,
17426892-17426979,17427133-17427367
Length = 468
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVSGKSENVWGSF 618
FP F FG T+++Q EG G++ ++W ++
Sbjct: 33 FPHDFAFGAGTSAYQYEGGAAEDGRTPSIWDTY 65
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWN--VSGKSENVWGSFN 621
FP+GF FG T+++Q + + V + +N+W +F+
Sbjct: 31 FPEGFLFGTGTSAYQYDVQYEGAVDKRGQNIWDTFS 66
>12_01_0596 +
4867388-4867405,4869095-4869151,4869624-4869701,
4870467-4870549,4870775-4870874,4871384-4871659,
4872198-4872258,4872365-4872465
Length = 257
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 202 LAIRSTTALHSFIGNETSTLCRL*TYTGNRGVENTGVSCHVERFITKYSQK*PLE 366
+A+ + A H FIG S C T TG + N CHV+ + + S++ P E
Sbjct: 1 MAVPNLEAFHKFIGQPVSIFCSSRTDTGVHALSNV---CHVD--VERISKRKPGE 50
>09_04_0524 + 18321110-18323978,18324098-18324576
Length = 1115
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 418 VWQRRSAVRDDTMAWLTTLSILAVCHTGLAAYTKFPDGFTFGV 546
++Q+ DD + LT+ +++ +G+ P+G+TF V
Sbjct: 761 LYQKLDISMDDVLRGLTSANVIGTGSSGVVYKVDTPNGYTFAV 803
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 466 TTLSILAVCHTGLAAYTKFPDGFTFGVATASHQIEGAWNVSGKSENVW 609
T L +A C T ++A DG F V + +I W +GK V+
Sbjct: 270 TNLFEIAKCKTSVSAIEMSNDGTQFVVTSPDRRIRVFWFKTGKLRRVY 317
>05_05_0209 - 23282848-23284110
Length = 420
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 457 AWLTTLSILAVCHTGLAAYTKFPDGFTFGVATASH 561
++ +T+S+LA+ T L T FP VA A H
Sbjct: 214 SFASTVSVLAMAATALPVRTLFPSARARAVAVAGH 248
>04_04_0222 - 23717106-23717162,23717527-23717670
Length = 66
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 520 FPDGFTFGVATASHQIEGAWNVS 588
FP GF FG +++S+Q+ WN+S
Sbjct: 34 FPKGFIFGTSSSSYQL-FRWNMS 55
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 212 DQPRHFIPSSVMRRALSVAFKPIPGTEVWKI 304
D RHF P + R V F+P+ G ++ K+
Sbjct: 533 DVQRHFRPELISRLTEMVVFRPLSGEQLRKV 563
>02_01_0358 - 2575858-2576796
Length = 312
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 529 GFTFGVATASHQIEGAWNVS 588
G FG++ H I GAWN+S
Sbjct: 191 GLWFGISDMDHTILGAWNLS 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,213,384
Number of Sequences: 37544
Number of extensions: 341613
Number of successful extensions: 896
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -